RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
COPS7B-206ENST00000410017 KNDC1Q76NI1 1749 aa20.15■□□□□ 0.82
COPS7B-206ENST00000410017 FRMPD1Q5SYB0 1578 aa20.15■□□□□ 0.82
COPS7B-206ENST00000410017 PHACTR3Q96KR7 559 aa20.14■□□□□ 0.81
COPS7B-206ENST00000410017 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.81
COPS7B-206ENST00000410017 PTPRMP28827 1452 aa20.13■□□□□ 0.81
COPS7B-206ENST00000410017 ERC2O15083 957 aa20.13■□□□□ 0.81
COPS7B-206ENST00000410017 SYAP1Q96A49 352 aaPredicted RBP20.13■□□□□ 0.81
COPS7B-206ENST00000410017 POLKQ9UBT6 870 aa20.13■□□□□ 0.81
COPS7B-206ENST00000410017 KIF20BQ96Q89 1820 aa20.12■□□□□ 0.81
COPS7B-206ENST00000410017 BRD1O95696 1058 aa20.12■□□□□ 0.81
COPS7B-206ENST00000410017 SAFB2Q14151 953 aaKnown RBP eCLIP20.12■□□□□ 0.81
COPS7B-206ENST00000410017 TSPY26PQ9H489 355 aa20.12■□□□□ 0.81
COPS7B-206ENST00000410017 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
COPS7B-206ENST00000410017 KIAA2012Q0VF49 1180 aa20.11■□□□□ 0.81
COPS7B-206ENST00000410017 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
COPS7B-206ENST00000410017 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
COPS7B-206ENST00000410017 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
COPS7B-206ENST00000410017 CPSF1Q10570 1443 aaKnown RBP20.11■□□□□ 0.81
COPS7B-206ENST00000410017 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
COPS7B-206ENST00000410017 CUL4AQ13619 759 aa20.11■□□□□ 0.81
COPS7B-206ENST00000410017 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
COPS7B-206ENST00000410017 OSBPL3Q9H4L5 887 aa20.11■□□□□ 0.81
COPS7B-206ENST00000410017 MLH3Q9UHC1 1453 aa20.1■□□□□ 0.81
COPS7B-206ENST00000410017 MYRIPQ8NFW9 859 aa20.1■□□□□ 0.81
COPS7B-206ENST00000410017 INTS4Q96HW7 963 aaKnown RBP20.1■□□□□ 0.81
COPS7B-206ENST00000410017 ELL2O00472 640 aaPredicted RBP20.09■□□□□ 0.81
COPS7B-206ENST00000410017 CEP85Q6P2H3 762 aa20.09■□□□□ 0.81
COPS7B-206ENST00000410017 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
COPS7B-206ENST00000410017 GGT6Q6P531 493 aa20.09■□□□□ 0.81
COPS7B-206ENST00000410017 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
COPS7B-206ENST00000410017 CCDC94Q9BW85 323 aaPredicted RBP20.09■□□□□ 0.81
COPS7B-206ENST00000410017 PHF14O94880 888 aa20.08■□□□□ 0.81
COPS7B-206ENST00000410017 TMX3Q96JJ7 454 aa20.08■□□□□ 0.81
COPS7B-206ENST00000410017 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
COPS7B-206ENST00000410017 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.8
COPS7B-206ENST00000410017 IL13P35225 146 aa20.07■□□□□ 0.8
COPS7B-206ENST00000410017 OTUD7AQ8TE49 926 aaPredicted RBP20.07■□□□□ 0.8
COPS7B-206ENST00000410017 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
COPS7B-206ENST00000410017 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
COPS7B-206ENST00000410017 STK26Q9P289 416 aa20.07■□□□□ 0.8
COPS7B-206ENST00000410017 HMGN5P82970 282 aaKnown RBP20.06■□□□□ 0.8
COPS7B-206ENST00000410017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.06■□□□□ 0.88e-7■□□□□ 9.2
COPS7B-206ENST00000410017 MINK1Q8N4C8 1332 aaPredicted RBP20.06■□□□□ 0.8
COPS7B-206ENST00000410017 PTMAP06454 111 aaKnown RBP20.06■□□□□ 0.8
COPS7B-206ENST00000410017 HMOX1P09601 288 aa20.06■□□□□ 0.8
COPS7B-206ENST00000410017 GTF2F1P35269 517 aaKnown RBP eCLIP20.06■□□□□ 0.8
COPS7B-206ENST00000410017 UTP14CQ5TAP6 766 aaKnown RBP20.06■□□□□ 0.8
COPS7B-206ENST00000410017 ARHGEF40Q8TER5 1519 aa20.06■□□□□ 0.8
COPS7B-206ENST00000410017 IL17RAQ96F46 866 aa20.06■□□□□ 0.8
COPS7B-206ENST00000410017 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
COPS7B-206ENST00000410017 SIGLEC1Q9BZZ2 1709 aa20.06■□□□□ 0.8
COPS7B-206ENST00000410017 ANAPC15P60006 121 aa20.05■□□□□ 0.8
COPS7B-206ENST00000410017 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
COPS7B-206ENST00000410017 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
COPS7B-206ENST00000410017 RIMS2Q9UQ26 1411 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 RTL1A6NKG5 1358 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 NEK4P51957 841 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 RICTORQ6R327 1708 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 RGS12O14924 1447 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 RNF214Q8ND24 703 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
COPS7B-206ENST00000410017 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
COPS7B-206ENST00000410017 PTPRCP08575 1304 aa20.03■□□□□ 0.8
COPS7B-206ENST00000410017 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
COPS7B-206ENST00000410017 ATP7BP35670 1465 aa20.03■□□□□ 0.8
COPS7B-206ENST00000410017 CDK12Q9NYV4 1490 aaPredicted RBP20.02■□□□□ 0.8
COPS7B-206ENST00000410017 HMMRO75330 724 aa20.02■□□□□ 0.8
COPS7B-206ENST00000410017 MCCP23508 829 aa20.02■□□□□ 0.8
COPS7B-206ENST00000410017 AATKQ6ZMQ8 1374 aa20.02■□□□□ 0.79
COPS7B-206ENST00000410017 SMARCA5O60264 1052 aaPredicted RBP20.01■□□□□ 0.79
COPS7B-206ENST00000410017 CHAMP1Q96JM3 812 aa20.01■□□□□ 0.79
COPS7B-206ENST00000410017 LETM1O95202 739 aaPredicted RBP20.01■□□□□ 0.79
COPS7B-206ENST00000410017 IDI1Q13907 227 aa20.01■□□□□ 0.79
COPS7B-206ENST00000410017 PDE1AP54750 535 aa20■□□□□ 0.79
COPS7B-206ENST00000410017 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
COPS7B-206ENST00000410017 KIAA0232Q92628 1395 aa20■□□□□ 0.79
COPS7B-206ENST00000410017 EPB41L2O43491 1005 aaKnown RBP19.99■□□□□ 0.79
COPS7B-206ENST00000410017 NOLC1Q14978 699 aaKnown RBP eCLIP19.99■□□□□ 0.79
COPS7B-206ENST00000410017 SSH2Q76I76 1423 aa19.98■□□□□ 0.79
COPS7B-206ENST00000410017 MAP2P11137 1827 aaKnown RBP19.98■□□□□ 0.79
COPS7B-206ENST00000410017 DMTNQ08495 405 aa19.98■□□□□ 0.79
COPS7B-206ENST00000410017 ESYT1Q9BSJ8 1104 aa19.98■□□□□ 0.79
COPS7B-206ENST00000410017 SPTLC3Q9NUV7 552 aa19.98■□□□□ 0.79
COPS7B-206ENST00000410017 DNTTIP2Q5QJE6 756 aaKnown RBP19.98■□□□□ 0.79
COPS7B-206ENST00000410017 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
COPS7B-206ENST00000410017 FOXD4L5Q5VV16 416 aaPredicted RBP19.97■□□□□ 0.79
COPS7B-206ENST00000410017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.97■□□□□ 0.79
COPS7B-206ENST00000410017 FOXD4L4Q8WXT5 416 aaPredicted RBP19.97■□□□□ 0.79
COPS7B-206ENST00000410017 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
COPS7B-206ENST00000410017 MSH6P52701 1360 aa19.96■□□□□ 0.79
COPS7B-206ENST00000410017 CHL1O00533 1208 aa19.96■□□□□ 0.79
COPS7B-206ENST00000410017 FBLN1P23142 703 aa19.96■□□□□ 0.79
COPS7B-206ENST00000410017 EMILIN1Q9Y6C2 1016 aa19.96■□□□□ 0.79
COPS7B-206ENST00000410017 CCDC183Q5T5S1 534 aa19.95■□□□□ 0.78
COPS7B-206ENST00000410017 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
COPS7B-206ENST00000410017 MEIS3Q99687 375 aa19.95■□□□□ 0.78
COPS7B-206ENST00000410017 SALL3Q9BXA9 1300 aa19.95■□□□□ 0.78
COPS7B-206ENST00000410017 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
COPS7B-206ENST00000410017 FKBP5Q13451 457 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms