RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 PLCD3Q8N3E9 789 aa27.01■■□□□ 1.91
CUEDC1-202ENST00000407144 CHAMP1Q96JM3 812 aa27.01■■□□□ 1.91
CUEDC1-202ENST00000407144 NSD3Q9BZ95 1437 aa27.01■■□□□ 1.91
CUEDC1-202ENST00000407144 PIK3R4Q99570 1358 aa27.01■■□□□ 1.91
CUEDC1-202ENST00000407144 MCM2P49736 904 aa27.01■■□□□ 1.91
CUEDC1-202ENST00000407144 ARHGEF40Q8TER5 1519 aa27■■□□□ 1.91
CUEDC1-202ENST00000407144 MYOM2P54296 1465 aa27■■□□□ 1.91
CUEDC1-202ENST00000407144 MPNDQ8N594 471 aa27■■□□□ 1.91
CUEDC1-202ENST00000407144 SIGLEC1Q9BZZ2 1709 aa27■■□□□ 1.91
CUEDC1-202ENST00000407144 ZFYVE16Q7Z3T8 1539 aa27■■□□□ 1.91
CUEDC1-202ENST00000407144 MTHFSP49914 203 aa26.99■■□□□ 1.91
CUEDC1-202ENST00000407144 CCDC183Q5T5S1 534 aa26.99■■□□□ 1.91
CUEDC1-202ENST00000407144 ZNF428Q96B54 188 aa26.99■■□□□ 1.91
CUEDC1-202ENST00000407144 TTC22Q5TAA0 569 aa26.99■■□□□ 1.91
CUEDC1-202ENST00000407144 PLEKHM2Q8IWE5 1019 aa26.99■■□□□ 1.91
CUEDC1-202ENST00000407144 SMTNL1A8MU46 457 aa26.98■■□□□ 1.91
CUEDC1-202ENST00000407144 KCNF1Q9H3M0 494 aa26.98■■□□□ 1.91
CUEDC1-202ENST00000407144 PYCARDQ9ULZ3 195 aa26.98■■□□□ 1.91
CUEDC1-202ENST00000407144 ABCA6Q8N139 1617 aa26.98■■□□□ 1.91
CUEDC1-202ENST00000407144 MYO3AQ8NEV4 1616 aa26.98■■□□□ 1.91
CUEDC1-202ENST00000407144 GOLGA6L6A8MZA4 724 aa26.98■■□□□ 1.91
CUEDC1-202ENST00000407144 CUL4AQ13619 759 aa26.97■■□□□ 1.91
CUEDC1-202ENST00000407144 KRT222Q8N1A0 295 aa26.97■■□□□ 1.91
CUEDC1-202ENST00000407144 KIF18AQ8NI77 898 aa26.97■■□□□ 1.91
CUEDC1-202ENST00000407144 TRPM2O94759 1503 aa26.97■■□□□ 1.91
CUEDC1-202ENST00000407144 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
CUEDC1-202ENST00000407144 INTS4Q96HW7 963 aaKnown RBP26.97■■□□□ 1.91
CUEDC1-202ENST00000407144 PTPRTO14522 1441 aa26.96■■□□□ 1.91
CUEDC1-202ENST00000407144 MLH3Q9UHC1 1453 aa26.96■■□□□ 1.91
CUEDC1-202ENST00000407144 CASC1Q6TDU7 716 aa26.96■■□□□ 1.91
CUEDC1-202ENST00000407144 TMEM87AQ8NBN3 555 aa26.96■■□□□ 1.91
CUEDC1-202ENST00000407144 FAM53CQ9NYF3 392 aa26.95■■□□□ 1.91
CUEDC1-202ENST00000407144 SPAG9O60271 1321 aaKnown RBP26.95■■□□□ 1.91
CUEDC1-202ENST00000407144 ARHGAP45Q92619 1136 aa26.95■■□□□ 1.9
CUEDC1-202ENST00000407144 TRIM35Q9UPQ4 493 aa26.95■■□□□ 1.9
CUEDC1-202ENST00000407144 ATP7AQ04656 1500 aa26.95■■□□□ 1.9
CUEDC1-202ENST00000407144 DIP2CQ9Y2E4 1556 aa26.94■■□□□ 1.9
CUEDC1-202ENST00000407144 REC8O95072 547 aa26.94■■□□□ 1.9
CUEDC1-202ENST00000407144 U2AF1L5P0DN76 240 aaPredicted RBP26.94■■□□□ 1.9
CUEDC1-202ENST00000407144 U2AF1Q01081 240 aaKnown RBP eCLIP26.94■■□□□ 1.9
CUEDC1-202ENST00000407144 SIRT2Q8IXJ6 389 aa26.94■■□□□ 1.9
CUEDC1-202ENST00000407144 MX1P20591 662 aa26.93■■□□□ 1.9
CUEDC1-202ENST00000407144 TMPOP42166 694 aaKnown RBP26.93■■□□□ 1.9
CUEDC1-202ENST00000407144 TMX3Q96JJ7 454 aa26.93■■□□□ 1.9
CUEDC1-202ENST00000407144 PAXBP1Q9Y5B6 917 aa26.92■■□□□ 1.9
CUEDC1-202ENST00000407144 NEURL4Q96JN8 1562 aa26.92■■□□□ 1.9
CUEDC1-202ENST00000407144 PLEKHF1Q96S99 279 aa26.91■■□□□ 1.9
CUEDC1-202ENST00000407144 PTCH1Q13635 1447 aa26.91■■□□□ 1.9
CUEDC1-202ENST00000407144 GADD45BO75293 160 aaPredicted RBP26.91■■□□□ 1.9
CUEDC1-202ENST00000407144 HCLS1P14317 486 aaPredicted RBP26.91■■□□□ 1.9
CUEDC1-202ENST00000407144 CAPN2P17655 700 aa26.9■■□□□ 1.9
CUEDC1-202ENST00000407144 FOXD4L5Q5VV16 416 aaPredicted RBP26.9■■□□□ 1.9
CUEDC1-202ENST00000407144 USP48Q86UV5 1035 aa26.9■■□□□ 1.9
CUEDC1-202ENST00000407144 FOXD4L4Q8WXT5 416 aaPredicted RBP26.9■■□□□ 1.9
CUEDC1-202ENST00000407144 IRX3P78415 501 aaPredicted RBP26.88■■□□□ 1.89
CUEDC1-202ENST00000407144 FUCA2Q9BTY2 467 aa26.87■■□□□ 1.89
CUEDC1-202ENST00000407144 NSD2O96028 1365 aa26.87■■□□□ 1.89
CUEDC1-202ENST00000407144 ZNF397Q8NF99 534 aaPredicted RBP26.87■■□□□ 1.89
CUEDC1-202ENST00000407144 ATAD2Q6PL18 1390 aa26.86■■□□□ 1.89
CUEDC1-202ENST00000407144 DCTPP1Q9H773 170 aa26.85■■□□□ 1.89
CUEDC1-202ENST00000407144 WDR33Q9C0J8 1336 aaKnown RBP26.85■■□□□ 1.89
CUEDC1-202ENST00000407144 PAXIP1Q6ZW49 1069 aaPredicted RBP26.84■■□□□ 1.89
CUEDC1-202ENST00000407144 C1orf115Q9H7X2 142 aa26.84■■□□□ 1.89
CUEDC1-202ENST00000407144 ERC2O15083 957 aa26.83■■□□□ 1.89
CUEDC1-202ENST00000407144 CCDC112Q8NEF3 446 aa26.83■■□□□ 1.89
CUEDC1-202ENST00000407144 KIF24Q5T7B8 1368 aa26.83■■□□□ 1.88
CUEDC1-202ENST00000407144 ABCC4O15439 1325 aa26.82■■□□□ 1.88
CUEDC1-202ENST00000407144 SDSP20132 328 aa26.82■■□□□ 1.88
CUEDC1-202ENST00000407144 AP5Z1O43299 807 aa26.81■■□□□ 1.88
CUEDC1-202ENST00000407144 NEK4P51957 841 aa26.81■■□□□ 1.88
CUEDC1-202ENST00000407144 UBE2HP62256 183 aa26.81■■□□□ 1.88
CUEDC1-202ENST00000407144 TEX2Q8IWB9 1127 aa26.81■■□□□ 1.88
CUEDC1-202ENST00000407144 CHRM1P11229 460 aaPredicted RBP26.81■■□□□ 1.88
CUEDC1-202ENST00000407144 RTL1A6NKG5 1358 aa26.8■■□□□ 1.88
CUEDC1-202ENST00000407144 SMARCA5O60264 1052 aaPredicted RBP26.8■■□□□ 1.88
CUEDC1-202ENST00000407144 SLFNL1Q499Z3 407 aa26.8■■□□□ 1.88
CUEDC1-202ENST00000407144 RPAP1Q9BWH6 1393 aaPredicted RBP26.79■■□□□ 1.88
CUEDC1-202ENST00000407144 TNNT1P13805 278 aa26.79■■□□□ 1.88
CUEDC1-202ENST00000407144 MRPL50Q8N5N7 158 aaKnown RBP26.79■■□□□ 1.88
CUEDC1-202ENST00000407144 TRIM6-TRIM34B2RNG4 842 aa26.78■■□□□ 1.88
CUEDC1-202ENST00000407144 TRIM34Q9BYJ4 488 aa26.78■■□□□ 1.88
CUEDC1-202ENST00000407144 GDPD2Q9HCC8 539 aa26.78■■□□□ 1.88
CUEDC1-202ENST00000407144 CYP2C19P33261 490 aa26.77■■□□□ 1.88
CUEDC1-202ENST00000407144 EFCC1Q9HA90 598 aa26.77■■□□□ 1.88
CUEDC1-202ENST00000407144 KIF1BPQ96EK5 621 aa26.77■■□□□ 1.88
CUEDC1-202ENST00000407144 ANAPC15P60006 121 aa26.76■■□□□ 1.87
CUEDC1-202ENST00000407144 KMT5BQ4FZB7 885 aa26.76■■□□□ 1.87
CUEDC1-202ENST00000407144 IL17RAQ96F46 866 aa26.76■■□□□ 1.87
CUEDC1-202ENST00000407144 FEZ2Q9UHY8 353 aaPredicted RBP26.76■■□□□ 1.87
CUEDC1-202ENST00000407144 YY1AP1Q9H869 796 aa26.75■■□□□ 1.87
CUEDC1-202ENST00000407144 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.75■■□□□ 1.87
CUEDC1-202ENST00000407144 PLCB2Q00722 1185 aa26.75■■□□□ 1.87
CUEDC1-202ENST00000407144 CFAP70Q5T0N1 1121 aa26.75■■□□□ 1.87
CUEDC1-202ENST00000407144 SPC24Q8NBT2 197 aa26.75■■□□□ 1.87
CUEDC1-202ENST00000407144 PTGS1P23219 599 aa26.74■■□□□ 1.87
CUEDC1-202ENST00000407144 RGS22Q8NE09 1264 aa26.74■■□□□ 1.87
CUEDC1-202ENST00000407144 C16orf45Q96MC5 204 aaPredicted RBP26.74■■□□□ 1.87
CUEDC1-202ENST00000407144 SLC12A5Q9H2X9 1139 aa26.74■■□□□ 1.87
CUEDC1-202ENST00000407144 ERICH4A6NGS2 130 aa26.73■■□□□ 1.87
CUEDC1-202ENST00000407144 MLECQ14165 292 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms