RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 MEGF6O75095 1541 aa25.41■■□□□ 1.66
PDLIM2-205ENST00000397761 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
PDLIM2-205ENST00000397761 ILDR2Q71H61 639 aa25.4■■□□□ 1.66
PDLIM2-205ENST00000397761 MAP3K5Q99683 1374 aa25.4■■□□□ 1.66
PDLIM2-205ENST00000397761 ZNF853P0CG23 659 aa25.4■■□□□ 1.66
PDLIM2-205ENST00000397761 PLEKHO1Q53GL0 409 aaPredicted RBP25.39■■□□□ 1.65
PDLIM2-205ENST00000397761 CARD10Q9BWT7 1032 aa25.39■■□□□ 1.65
PDLIM2-205ENST00000397761 SUPT16HQ9Y5B9 1047 aaKnown RBP25.39■■□□□ 1.65
PDLIM2-205ENST00000397761 CRB1P82279 1406 aa25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 THUMPD2Q9BTF0 503 aaKnown RBP25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 IFT57Q9NWB7 429 aa25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 RCAN3Q9UKA8 241 aa25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 FANCIQ9NVI1 1328 aa25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 SCN11AQ9UI33 1791 aa25.38■■□□□ 1.65
PDLIM2-205ENST00000397761 SHANK3Q9BYB0 1731 aa25.37■■□□□ 1.65
PDLIM2-205ENST00000397761 GNAT3A8MTJ3 354 aa25.37■■□□□ 1.65
PDLIM2-205ENST00000397761 BTG4Q9NY30 223 aa25.37■■□□□ 1.65
PDLIM2-205ENST00000397761 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
PDLIM2-205ENST00000397761 OVOS2A0A0G2JMS6 1433 aa25.36■■□□□ 1.65
PDLIM2-205ENST00000397761 SIPA1L3O60292 1781 aaPredicted RBP25.36■■□□□ 1.65
PDLIM2-205ENST00000397761 GNAI1P63096 354 aa25.35■■□□□ 1.65
PDLIM2-205ENST00000397761 TOM1L2Q6ZVM7 507 aa25.35■■□□□ 1.65
PDLIM2-205ENST00000397761 CFAP44Q96MT7 982 aa25.35■■□□□ 1.65
PDLIM2-205ENST00000397761 SLIT2O94813 1529 aa25.35■■□□□ 1.65
PDLIM2-205ENST00000397761 SPATA31A6Q5VVP1 1343 aa25.34■■□□□ 1.65
PDLIM2-205ENST00000397761 DCTN1Q14203 1278 aa25.34■■□□□ 1.65
PDLIM2-205ENST00000397761 LARP1Q6PKG0 1096 aaKnown RBP25.34■■□□□ 1.65
PDLIM2-205ENST00000397761 CEMIPQ8WUJ3 1361 aa25.34■■□□□ 1.65
PDLIM2-205ENST00000397761 TATP17735 454 aaPredicted RBP25.34■■□□□ 1.65
PDLIM2-205ENST00000397761 MCM10Q7L590 875 aa25.34■■□□□ 1.65
PDLIM2-205ENST00000397761 EVA1CP58658 441 aa25.33■■□□□ 1.65
PDLIM2-205ENST00000397761 AKAP4Q5JQC9 854 aa25.33■■□□□ 1.65
PDLIM2-205ENST00000397761 RTF1Q92541 710 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-205ENST00000397761 GTF3C3Q9Y5Q9 886 aa25.33■■□□□ 1.65
PDLIM2-205ENST00000397761 ZNF530Q6P9A1 599 aaPredicted RBP25.32■■□□□ 1.64
PDLIM2-205ENST00000397761 TSR2Q969E8 191 aaKnown RBP25.32■■□□□ 1.64
PDLIM2-205ENST00000397761 STRN4Q9NRL3 753 aa25.32■■□□□ 1.64
PDLIM2-205ENST00000397761 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-205ENST00000397761 CT47B1P0C2W7 299 aaPredicted RBP25.31■■□□□ 1.64
PDLIM2-205ENST00000397761 LRP6O75581 1613 aa25.3■■□□□ 1.64
PDLIM2-205ENST00000397761 ADAMTS2O95450 1211 aa25.3■■□□□ 1.64
PDLIM2-205ENST00000397761 IL17REQ8NFR9 667 aa25.3■■□□□ 1.64
PDLIM2-205ENST00000397761 KDM3BQ7LBC6 1761 aa25.3■■□□□ 1.64
PDLIM2-205ENST00000397761 CHL1O00533 1208 aa25.29■■□□□ 1.64
PDLIM2-205ENST00000397761 NUTM2BA6NNL0 878 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-205ENST00000397761 NUTM2EB1AL46 878 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-205ENST00000397761 NUTM2AQ8IVF1 878 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-205ENST00000397761 MBIPQ9NS73 344 aa25.28■■□□□ 1.64
PDLIM2-205ENST00000397761 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
PDLIM2-205ENST00000397761 DISP2A7MBM2 1401 aa25.28■■□□□ 1.64
PDLIM2-205ENST00000397761 IL2RBP14784 551 aa25.26■■□□□ 1.63
PDLIM2-205ENST00000397761 EXOSC9Q06265 439 aaKnown RBP25.26■■□□□ 1.63
PDLIM2-205ENST00000397761 C1orf141Q5JVX7 400 aa25.26■■□□□ 1.63
PDLIM2-205ENST00000397761 BABAM1Q9NWV8 329 aa25.26■■□□□ 1.63
PDLIM2-205ENST00000397761 RGS17Q9UGC6 210 aaPredicted RBP25.24■■□□□ 1.63
PDLIM2-205ENST00000397761 RRP1P56182 461 aaKnown RBP25.23■■□□□ 1.63
PDLIM2-205ENST00000397761 LAS1LQ9Y4W2 734 aaKnown RBP25.23■■□□□ 1.63
PDLIM2-205ENST00000397761 MRC1P22897 1456 aa25.23■■□□□ 1.63
PDLIM2-205ENST00000397761 NEFLP07196 543 aa25.22■■□□□ 1.63
PDLIM2-205ENST00000397761 PHKG2P15735 406 aa25.22■■□□□ 1.63
PDLIM2-205ENST00000397761 KDM6AO15550 1401 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-205ENST00000397761 BCL9LQ86UU0 1499 aa25.22■■□□□ 1.63
PDLIM2-205ENST00000397761 RNMTO43148 476 aaKnown RBP25.21■■□□□ 1.63
PDLIM2-205ENST00000397761 LGR6Q9HBX8 967 aa25.21■■□□□ 1.63
PDLIM2-205ENST00000397761 CYP27B1O15528 508 aa25.21■■□□□ 1.63
PDLIM2-205ENST00000397761 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
PDLIM2-205ENST00000397761 CACNA1FO60840 1977 aa25.2■■□□□ 1.62
PDLIM2-205ENST00000397761 RARSP54136 660 aaKnown RBP25.2■■□□□ 1.62
PDLIM2-205ENST00000397761 TAF7Q15545 349 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-205ENST00000397761 FNBP4Q8N3X1 1017 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-205ENST00000397761 ZCRB1Q8TBF4 217 aaKnown RBP25.2■■□□□ 1.62
PDLIM2-205ENST00000397761 ZNF428Q96B54 188 aa25.2■■□□□ 1.62
PDLIM2-205ENST00000397761 SPATA31A1Q5TZJ5 1347 aa25.19■■□□□ 1.62
PDLIM2-205ENST00000397761 PCDH11XQ9BZA7 1347 aa25.19■■□□□ 1.62
PDLIM2-205ENST00000397761 PCDH11YQ9BZA8 1340 aa25.19■■□□□ 1.62
PDLIM2-205ENST00000397761 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
PDLIM2-205ENST00000397761 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
PDLIM2-205ENST00000397761 SPATA31A5Q5VU36 1347 aa25.18■■□□□ 1.62
PDLIM2-205ENST00000397761 SPATA31A7Q8IWB4 1347 aa25.18■■□□□ 1.62
PDLIM2-205ENST00000397761 SOCS7O14512 581 aa25.17■■□□□ 1.62
PDLIM2-205ENST00000397761 HSP90AB1P08238 724 aaKnown RBP25.16■■□□□ 1.62
PDLIM2-205ENST00000397761 FKBP8Q14318 412 aa25.16■■□□□ 1.62
PDLIM2-205ENST00000397761 UNC5CLQ8IV45 518 aa25.16■■□□□ 1.62
PDLIM2-205ENST00000397761 VAMP4O75379 141 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 NKX1-1Q15270 411 aaPredicted RBP25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 MEX3CQ5U5Q3 659 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 DCAF5Q96JK2 942 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 TSPYL4Q9UJ04 414 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 TOGARAM1Q9Y4F4 1720 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 BCAR3O75815 825 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 ERICH6BQ5W0A0 696 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 C8orf58Q8NAV2 365 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 NGLY1Q96IV0 654 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 C8orf37Q96NL8 207 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 CDCA7Q9BWT1 371 aaPredicted RBP25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 USP35Q9P2H5 1018 aa25.15■■□□□ 1.62
PDLIM2-205ENST00000397761 TSPYL6Q8N831 410 aa25.14■■□□□ 1.61
PDLIM2-205ENST00000397761 TEFQ10587 303 aa25.13■■□□□ 1.61
PDLIM2-205ENST00000397761 ALDH1L2Q3SY69 923 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms