RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 CARD10Q9BWT7 1032 aa18.37■□□□□ 0.53
PPARG-205ENST00000397010 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
PPARG-205ENST00000397010 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
PPARG-205ENST00000397010 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
PPARG-205ENST00000397010 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
PPARG-205ENST00000397010 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
PPARG-205ENST00000397010 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
PPARG-205ENST00000397010 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
PPARG-205ENST00000397010 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
PPARG-205ENST00000397010 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
PPARG-205ENST00000397010 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
PPARG-205ENST00000397010 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.53
PPARG-205ENST00000397010 MCM10Q7L590 875 aa18.33■□□□□ 0.53
PPARG-205ENST00000397010 FBXO41Q8TF61 875 aa18.33■□□□□ 0.53
PPARG-205ENST00000397010 MAP3K5Q99683 1374 aa18.33■□□□□ 0.53
PPARG-205ENST00000397010 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
PPARG-205ENST00000397010 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
PPARG-205ENST00000397010 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
PPARG-205ENST00000397010 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
PPARG-205ENST00000397010 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
PPARG-205ENST00000397010 IL2RBP14784 551 aa18.32■□□□□ 0.52
PPARG-205ENST00000397010 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
PPARG-205ENST00000397010 AMOTQ4VCS5 1084 aa18.32■□□□□ 0.52
PPARG-205ENST00000397010 FNBP4Q8N3X1 1017 aaPredicted RBP18.32■□□□□ 0.52
PPARG-205ENST00000397010 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
PPARG-205ENST00000397010 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
PPARG-205ENST00000397010 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
PPARG-205ENST00000397010 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
PPARG-205ENST00000397010 DISP2A7MBM2 1401 aa18.3■□□□□ 0.52
PPARG-205ENST00000397010 SLFN5Q08AF3 891 aa18.3■□□□□ 0.52
PPARG-205ENST00000397010 USP21Q9UK80 565 aa18.3■□□□□ 0.52
PPARG-205ENST00000397010 AFF2P51816 1311 aa18.3■□□□□ 0.52
PPARG-205ENST00000397010 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
PPARG-205ENST00000397010 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
PPARG-205ENST00000397010 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
PPARG-205ENST00000397010 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
PPARG-205ENST00000397010 ADAMTS7Q9UKP4 1686 aa18.29■□□□□ 0.52
PPARG-205ENST00000397010 E9PSI1 815 aa18.28■□□□□ 0.52
PPARG-205ENST00000397010 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
PPARG-205ENST00000397010 SPG7Q9UQ90 795 aa18.28■□□□□ 0.52
PPARG-205ENST00000397010 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
PPARG-205ENST00000397010 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
PPARG-205ENST00000397010 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.52
PPARG-205ENST00000397010 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
PPARG-205ENST00000397010 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
PPARG-205ENST00000397010 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.51
PPARG-205ENST00000397010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.27■□□□□ 0.518e-10■□□□□ 8.2
PPARG-205ENST00000397010 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
PPARG-205ENST00000397010 GLI3P10071 1580 aa18.26■□□□□ 0.51
PPARG-205ENST00000397010 CYP27B1O15528 508 aa18.26■□□□□ 0.51
PPARG-205ENST00000397010 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
PPARG-205ENST00000397010 IL17REQ8NFR9 667 aa18.26■□□□□ 0.51
PPARG-205ENST00000397010 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
PPARG-205ENST00000397010 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
PPARG-205ENST00000397010 PHKG2P15735 406 aa18.25■□□□□ 0.51
PPARG-205ENST00000397010 VPS72Q15906 364 aa18.25■□□□□ 0.51
PPARG-205ENST00000397010 LGR6Q9HBX8 967 aa18.25■□□□□ 0.51
PPARG-205ENST00000397010 KDM6AO15550 1401 aaPredicted RBP18.25■□□□□ 0.51
PPARG-205ENST00000397010 TOGARAM1Q9Y4F4 1720 aa18.25■□□□□ 0.51
PPARG-205ENST00000397010 IL16Q14005 1332 aa18.25■□□□□ 0.51
PPARG-205ENST00000397010 PCDH11XQ9BZA7 1347 aa18.24■□□□□ 0.51
PPARG-205ENST00000397010 PCDH11YQ9BZA8 1340 aa18.24■□□□□ 0.51
PPARG-205ENST00000397010 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
PPARG-205ENST00000397010 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
PPARG-205ENST00000397010 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
PPARG-205ENST00000397010 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
PPARG-205ENST00000397010 TNS2Q63HR2 1409 aa18.23■□□□□ 0.51
PPARG-205ENST00000397010 DDX54Q8TDD1 881 aaKnown RBP18.23■□□□□ 0.51
PPARG-205ENST00000397010 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
PPARG-205ENST00000397010 THRAP3Q9Y2W1 955 aaKnown RBP18.23■□□□□ 0.51
PPARG-205ENST00000397010 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
PPARG-205ENST00000397010 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
PPARG-205ENST00000397010 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
PPARG-205ENST00000397010 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
PPARG-205ENST00000397010 ATRNO75882 1429 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 EP400Q96L91 3159 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
PPARG-205ENST00000397010 ZNF853P0CG23 659 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 GNAI1P63096 354 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 CFAP44Q96MT7 982 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 MBIPQ9NS73 344 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 ITGB4P16144 1822 aa18.21■□□□□ 0.51
PPARG-205ENST00000397010 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
PPARG-205ENST00000397010 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
PPARG-205ENST00000397010 MRC1P22897 1456 aa18.18■□□□□ 0.5
PPARG-205ENST00000397010 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
PPARG-205ENST00000397010 TEFQ10587 303 aa18.18■□□□□ 0.5
PPARG-205ENST00000397010 DDB1Q16531 1140 aa18.18■□□□□ 0.5
PPARG-205ENST00000397010 CDCA7Q9BWT1 371 aaPredicted RBP18.18■□□□□ 0.5
PPARG-205ENST00000397010 TRPC5Q9UL62 973 aaPredicted RBP18.18■□□□□ 0.5
PPARG-205ENST00000397010 A0A0G2JS52 829 aa18.17■□□□□ 0.5
PPARG-205ENST00000397010 EXOC5O00471 708 aa18.17■□□□□ 0.5
PPARG-205ENST00000397010 CHL1O00533 1208 aa18.17■□□□□ 0.5
PPARG-205ENST00000397010 MYT1Q01538 1121 aa18.17■□□□□ 0.5
PPARG-205ENST00000397010 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
PPARG-205ENST00000397010 GJD4Q96KN9 370 aaPredicted RBP18.17■□□□□ 0.5
PPARG-205ENST00000397010 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
PPARG-205ENST00000397010 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
PPARG-205ENST00000397010 TAF7Q15545 349 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms