RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 USP35Q9P2H5 1018 aa31.85■■■□□ 2.69
LRFN4-202ENST00000393952 PARP4Q9UKK3 1724 aaKnown RBP31.84■■■□□ 2.69
LRFN4-202ENST00000393952 BCL9LQ86UU0 1499 aa31.83■■■□□ 2.69
LRFN4-202ENST00000393952 GOLGA2Q08379 1002 aa31.83■■■□□ 2.69
LRFN4-202ENST00000393952 FNBP4Q8N3X1 1017 aaPredicted RBP31.83■■■□□ 2.69
LRFN4-202ENST00000393952 AMOTQ4VCS5 1084 aa31.82■■■□□ 2.68
LRFN4-202ENST00000393952 UNC5CLQ8IV45 518 aa31.82■■■□□ 2.68
LRFN4-202ENST00000393952 LMOD3Q0VAK6 560 aa31.81■■■□□ 2.68
LRFN4-202ENST00000393952 PKD1L3Q7Z443 1732 aa31.81■■■□□ 2.68
LRFN4-202ENST00000393952 OVOS2A0A0G2JMS6 1433 aa31.8■■■□□ 2.68
LRFN4-202ENST00000393952 ZNF530Q6P9A1 599 aaPredicted RBP31.8■■■□□ 2.68
LRFN4-202ENST00000393952 WDR63Q8IWG1 891 aa31.8■■■□□ 2.68
LRFN4-202ENST00000393952 IL2RBP14784 551 aa31.79■■■□□ 2.68
LRFN4-202ENST00000393952 THUMPD2Q9BTF0 503 aaKnown RBP31.79■■■□□ 2.68
LRFN4-202ENST00000393952 PLEKHG2Q9H7P9 1386 aa31.79■■■□□ 2.68
LRFN4-202ENST00000393952 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.78■■■□□ 2.68
LRFN4-202ENST00000393952 MAP3K5Q99683 1374 aa31.78■■■□□ 2.68
LRFN4-202ENST00000393952 SPINK5Q9NQ38 1064 aaPredicted RBP31.78■■■□□ 2.68
LRFN4-202ENST00000393952 WNK3Q9BYP7 1800 aa31.78■■■□□ 2.68
LRFN4-202ENST00000393952 SPATA31A1Q5TZJ5 1347 aa31.77■■■□□ 2.68
LRFN4-202ENST00000393952 DCTN1Q14203 1278 aa31.77■■■□□ 2.68
LRFN4-202ENST00000393952 SPATA31A5Q5VU36 1347 aa31.77■■■□□ 2.68
LRFN4-202ENST00000393952 SPATA31A7Q8IWB4 1347 aa31.77■■■□□ 2.68
LRFN4-202ENST00000393952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.77■■■□□ 2.68
LRFN4-202ENST00000393952 USP21Q9UK80 565 aa31.77■■■□□ 2.68
LRFN4-202ENST00000393952 GNAT3A8MTJ3 354 aa31.76■■■□□ 2.67
LRFN4-202ENST00000393952 SLFN5Q08AF3 891 aa31.76■■■□□ 2.67
LRFN4-202ENST00000393952 SPG7Q9UQ90 795 aa31.76■■■□□ 2.67
LRFN4-202ENST00000393952 AFF2P51816 1311 aa31.75■■■□□ 2.67
LRFN4-202ENST00000393952 MCM10Q7L590 875 aa31.75■■■□□ 2.67
LRFN4-202ENST00000393952 CCDC9Q9Y3X0 531 aaKnown RBP31.75■■■□□ 2.67
LRFN4-202ENST00000393952 DISP2A7MBM2 1401 aa31.75■■■□□ 2.67
LRFN4-202ENST00000393952 VPS72Q15906 364 aa31.73■■■□□ 2.67
LRFN4-202ENST00000393952 AKAP4Q5JQC9 854 aa31.73■■■□□ 2.67
LRFN4-202ENST00000393952 RTF1Q92541 710 aaKnown RBP31.73■■■□□ 2.67
LRFN4-202ENST00000393952 E9PSI1 815 aa31.73■■■□□ 2.67
LRFN4-202ENST00000393952 HTATSF1O43719 755 aaKnown RBP31.73■■■□□ 2.67
LRFN4-202ENST00000393952 C1orf141Q5JVX7 400 aa31.73■■■□□ 2.67
LRFN4-202ENST00000393952 IL16Q14005 1332 aa31.71■■■□□ 2.67
LRFN4-202ENST00000393952 SHANK3Q9BYB0 1731 aa31.71■■■□□ 2.67
LRFN4-202ENST00000393952 TRMT2AQ8IZ69 625 aaKnown RBP31.7■■■□□ 2.67
LRFN4-202ENST00000393952 ZCRB1Q8TBF4 217 aaKnown RBP31.7■■■□□ 2.67
LRFN4-202ENST00000393952 THRAP3Q9Y2W1 955 aaKnown RBP31.7■■■□□ 2.67
LRFN4-202ENST00000393952 CALD1Q05682 793 aaKnown RBP31.68■■■□□ 2.66
LRFN4-202ENST00000393952 DUSP27Q5VZP5 1158 aa31.68■■■□□ 2.66
LRFN4-202ENST00000393952 IL17REQ8NFR9 667 aa31.68■■■□□ 2.66
LRFN4-202ENST00000393952 VIRMAQ69YN4 1812 aaKnown RBP31.68■■■□□ 2.66
LRFN4-202ENST00000393952 LRRC37A3O60309 1634 aa31.68■■■□□ 2.66
LRFN4-202ENST00000393952 CYP27B1O15528 508 aa31.68■■■□□ 2.66
LRFN4-202ENST00000393952 PHKG2P15735 406 aa31.67■■■□□ 2.66
LRFN4-202ENST00000393952 IFNL2Q8IZJ0 200 aa31.66■■■□□ 2.66
LRFN4-202ENST00000393952 MPRIPQ6WCQ1 1025 aa31.65■■■□□ 2.66
LRFN4-202ENST00000393952 PCDH11XQ9BZA7 1347 aa31.65■■■□□ 2.66
LRFN4-202ENST00000393952 PCDH11YQ9BZA8 1340 aa31.65■■■□□ 2.66
LRFN4-202ENST00000393952 BARGINQ6ZT62 677 aa31.64■■■□□ 2.66
LRFN4-202ENST00000393952 LGR6Q9HBX8 967 aa31.64■■■□□ 2.66
LRFN4-202ENST00000393952 LAS1LQ9Y4W2 734 aaKnown RBP31.64■■■□□ 2.66
LRFN4-202ENST00000393952 CDCA7Q9BWT1 371 aaPredicted RBP31.64■■■□□ 2.65
LRFN4-202ENST00000393952 MYH16Q9H6N6 1097 aa31.64■■■□□ 2.65
LRFN4-202ENST00000393952 ADAMTS7Q9UKP4 1686 aa31.64■■■□□ 2.65
LRFN4-202ENST00000393952 CEMIPQ8WUJ3 1361 aa31.62■■■□□ 2.65
LRFN4-202ENST00000393952 ATRNO75882 1429 aa31.62■■■□□ 2.65
LRFN4-202ENST00000393952 TSR2Q969E8 191 aaKnown RBP31.62■■■□□ 2.65
LRFN4-202ENST00000393952 IFT57Q9NWB7 429 aa31.62■■■□□ 2.65
LRFN4-202ENST00000393952 RNMTO43148 476 aaKnown RBP31.61■■■□□ 2.65
LRFN4-202ENST00000393952 ZNF853P0CG23 659 aa31.61■■■□□ 2.65
LRFN4-202ENST00000393952 FANCIQ9NVI1 1328 aa31.61■■■□□ 2.65
LRFN4-202ENST00000393952 SCN11AQ9UI33 1791 aa31.61■■■□□ 2.65
LRFN4-202ENST00000393952 GNAI1P63096 354 aa31.6■■■□□ 2.65
LRFN4-202ENST00000393952 DDX54Q8TDD1 881 aaKnown RBP31.6■■■□□ 2.65
LRFN4-202ENST00000393952 KDM6AO15550 1401 aaPredicted RBP31.6■■■□□ 2.65
LRFN4-202ENST00000393952 FAM98CQ17RN3 349 aaKnown RBP31.6■■■□□ 2.65
LRFN4-202ENST00000393952 CFAP44Q96MT7 982 aa31.6■■■□□ 2.65
LRFN4-202ENST00000393952 GLI3P10071 1580 aa31.59■■■□□ 2.65
LRFN4-202ENST00000393952 TRPC5Q9UL62 973 aaPredicted RBP31.59■■■□□ 2.65
LRFN4-202ENST00000393952 TNS2Q63HR2 1409 aa31.59■■■□□ 2.65
LRFN4-202ENST00000393952 EXOC5O00471 708 aa31.57■■■□□ 2.64
LRFN4-202ENST00000393952 GJD4Q96KN9 370 aaPredicted RBP31.57■■■□□ 2.64
LRFN4-202ENST00000393952 HSP90AB1P08238 724 aaKnown RBP31.56■■■□□ 2.64
LRFN4-202ENST00000393952 MBIPQ9NS73 344 aa31.56■■■□□ 2.64
LRFN4-202ENST00000393952 DCAF5Q96JK2 942 aa31.55■■■□□ 2.64
LRFN4-202ENST00000393952 CHL1O00533 1208 aa31.54■■■□□ 2.64
LRFN4-202ENST00000393952 DDB1Q16531 1140 aa31.54■■■□□ 2.64
LRFN4-202ENST00000393952 QTRT2Q9H974 415 aaKnown RBP31.54■■■□□ 2.64
LRFN4-202ENST00000393952 TEFQ10587 303 aa31.53■■■□□ 2.64
LRFN4-202ENST00000393952 NKX1-1Q15270 411 aaPredicted RBP31.53■■■□□ 2.64
LRFN4-202ENST00000393952 MIS18AQ9NYP9 233 aa31.53■■■□□ 2.64
LRFN4-202ENST00000393952 SIPA1L3O60292 1781 aaPredicted RBP31.53■■■□□ 2.64
LRFN4-202ENST00000393952 TAF7Q15545 349 aaPredicted RBP31.52■■■□□ 2.64
LRFN4-202ENST00000393952 THSD7AQ9UPZ6 1657 aa31.52■■■□□ 2.64
LRFN4-202ENST00000393952 EXOSC9Q06265 439 aaKnown RBP31.5■■■□□ 2.63
LRFN4-202ENST00000393952 TSPYL4Q9UJ04 414 aa31.5■■■□□ 2.63
LRFN4-202ENST00000393952 MRC1P22897 1456 aa31.49■■■□□ 2.63
LRFN4-202ENST00000393952 TOGARAM1Q9Y4F4 1720 aa31.48■■■□□ 2.63
LRFN4-202ENST00000393952 A0A0G2JS52 829 aa31.47■■■□□ 2.63
LRFN4-202ENST00000393952 MYT1Q01538 1121 aa31.47■■■□□ 2.63
LRFN4-202ENST00000393952 ZNF772Q68DY9 489 aaPredicted RBP31.47■■■□□ 2.63
LRFN4-202ENST00000393952 SLC52A2Q9HAB3 445 aa31.47■■■□□ 2.63
LRFN4-202ENST00000393952 KDM3BQ7LBC6 1761 aa31.46■■■□□ 2.63
LRFN4-202ENST00000393952 BABAM1Q9NWV8 329 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms