RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 LAMC1P11047 1609 aa19.83■□□□□ 0.77
PHTF1-205ENST00000393357 NME9Q86XW9 330 aa19.83■□□□□ 0.77
PHTF1-205ENST00000393357 STAC3Q96MF2 364 aa19.83■□□□□ 0.76
PHTF1-205ENST00000393357 POLKQ9UBT6 870 aa19.83■□□□□ 0.76
PHTF1-205ENST00000393357 KIF3AQ9Y496 699 aa19.83■□□□□ 0.76
PHTF1-205ENST00000393357 RNF17Q9BXT8 1623 aaKnown RBP19.82■□□□□ 0.76
PHTF1-205ENST00000393357 UNC13BO14795 1591 aa19.82■□□□□ 0.76
PHTF1-205ENST00000393357 MBD3O95983 291 aa19.82■□□□□ 0.76
PHTF1-205ENST00000393357 NAA30Q147X3 362 aaPredicted RBP19.82■□□□□ 0.76
PHTF1-205ENST00000393357 CEP85Q6P2H3 762 aa19.82■□□□□ 0.76
PHTF1-205ENST00000393357 CDK19Q9BWU1 502 aa19.82■□□□□ 0.76
PHTF1-205ENST00000393357 CHMP4BQ9H444 224 aaKnown RBP19.82■□□□□ 0.76
PHTF1-205ENST00000393357 FCHSD2O94868 740 aa19.81■□□□□ 0.76
PHTF1-205ENST00000393357 FERMT3Q86UX7 667 aa19.81■□□□□ 0.76
PHTF1-205ENST00000393357 TAOK2Q9UL54 1235 aa19.81■□□□□ 0.76
PHTF1-205ENST00000393357 ANKRD36BQ8N2N9 1353 aa19.81■□□□□ 0.76
PHTF1-205ENST00000393357 NUTM1Q86Y26 1132 aa19.81■□□□□ 0.76
PHTF1-205ENST00000393357 SYAP1Q96A49 352 aaPredicted RBP19.81■□□□□ 0.76
PHTF1-205ENST00000393357 VPS37CA5D8V6 355 aaPredicted RBP19.8■□□□□ 0.76
PHTF1-205ENST00000393357 ZBTB22O15209 634 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 HS1BP3Q53T59 392 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 BCL2L12Q9HB09 334 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 FAM173BQ6P4H8 233 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 ZNF771Q7L3S4 317 aaPredicted RBP19.8■□□□□ 0.76
PHTF1-205ENST00000393357 G2E3Q7L622 706 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 UNC5CLQ8IV45 518 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 PDCL2Q8N4E4 241 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 FBXW7Q969H0 707 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.8■□□□□ 0.76
PHTF1-205ENST00000393357 PYCARDQ9ULZ3 195 aa19.8■□□□□ 0.76
PHTF1-205ENST00000393357 V9GYY5 206 aaPredicted RBP19.8■□□□□ 0.76
PHTF1-205ENST00000393357 SMAP1Q8IYB5 467 aaPredicted RBP19.79■□□□□ 0.76
PHTF1-205ENST00000393357 MYRIPQ8NFW9 859 aa19.79■□□□□ 0.76
PHTF1-205ENST00000393357 SHPRHQ149N8 1683 aa19.79■□□□□ 0.76
PHTF1-205ENST00000393357 C16orf45Q96MC5 204 aaPredicted RBP19.79■□□□□ 0.76
PHTF1-205ENST00000393357 ZSCAN20P17040 1043 aaPredicted RBP19.78■□□□□ 0.76
PHTF1-205ENST00000393357 PDE1AP54750 535 aa19.78■□□□□ 0.76
PHTF1-205ENST00000393357 CGNQ9P2M7 1197 aaKnown RBP19.78■□□□□ 0.76
PHTF1-205ENST00000393357 RIOK3O14730 519 aaKnown RBP19.77■□□□□ 0.76
PHTF1-205ENST00000393357 SULT6B1Q6IMI4 303 aa19.77■□□□□ 0.76
PHTF1-205ENST00000393357 ZBTB9Q96C00 473 aa19.77■□□□□ 0.76
PHTF1-205ENST00000393357 CLEC17AQ6ZS10 378 aa19.77■□□□□ 0.75
PHTF1-205ENST00000393357 SRCIN1Q9C0H9 1055 aa19.77■□□□□ 0.75
PHTF1-205ENST00000393357 IL25Q9H293 177 aa19.77■□□□□ 0.75
PHTF1-205ENST00000393357 MCCP23508 829 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 CHAF1AQ13111 956 aaPredicted RBP19.76■□□□□ 0.75
PHTF1-205ENST00000393357 CKAP2LQ8IYA6 745 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 ANKRD44Q8N8A2 993 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 MSH6P52701 1360 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 IBTKQ9P2D0 1353 aaPredicted RBP19.76■□□□□ 0.75
PHTF1-205ENST00000393357 VGLL3A8MV65 326 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 IL16Q14005 1332 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 TRERF1Q96PN7 1200 aa19.76■□□□□ 0.75
PHTF1-205ENST00000393357 PLCH2O75038 1416 aa19.75■□□□□ 0.75
PHTF1-205ENST00000393357 VGFO15240 615 aaPredicted RBP19.75■□□□□ 0.75
PHTF1-205ENST00000393357 BRD1O95696 1058 aa19.75■□□□□ 0.75
PHTF1-205ENST00000393357 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
PHTF1-205ENST00000393357 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
PHTF1-205ENST00000393357 ABCC4O15439 1325 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 ABCA6Q8N139 1617 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 TERF1P54274 439 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 FOXO3O43524 673 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 FOSBP53539 338 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 LRMPQ12912 555 aa19.74■□□□□ 0.75
PHTF1-205ENST00000393357 TRPM2O94759 1503 aa19.73■□□□□ 0.75
PHTF1-205ENST00000393357 PPFIA3O75145 1194 aa19.73■□□□□ 0.75
PHTF1-205ENST00000393357 IDI1Q13907 227 aa19.73■□□□□ 0.75
PHTF1-205ENST00000393357 MTERF4Q7Z6M4 381 aaKnown RBP19.73■□□□□ 0.75
PHTF1-205ENST00000393357 PIBF1Q8WXW3 757 aa19.73■□□□□ 0.75
PHTF1-205ENST00000393357 PTGS1P23219 599 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
PHTF1-205ENST00000393357 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 DMTNQ08495 405 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 CCDC83Q8IWF9 413 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 ESYT1Q9BSJ8 1104 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 AP5Z1O43299 807 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 PHF14O94880 888 aa19.72■□□□□ 0.75
PHTF1-205ENST00000393357 FKBP5Q13451 457 aaPredicted RBP19.72■□□□□ 0.75
PHTF1-205ENST00000393357 ZCCHC11Q5TAX3 1644 aaKnown RBP19.71■□□□□ 0.75
PHTF1-205ENST00000393357 MCM5P33992 734 aa19.71■□□□□ 0.75
PHTF1-205ENST00000393357 CWC27Q6UX04 472 aaKnown RBP19.71■□□□□ 0.75
PHTF1-205ENST00000393357 PNMA6EA0A0J9YXQ4 647 aa19.71■□□□□ 0.75
PHTF1-205ENST00000393357 ERICH4A6NGS2 130 aa19.71■□□□□ 0.75
PHTF1-205ENST00000393357 BBXQ8WY36 941 aaPredicted RBP19.71■□□□□ 0.75
PHTF1-205ENST00000393357 NECAB1Q8N987 351 aa19.7■□□□□ 0.74
PHTF1-205ENST00000393357 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
PHTF1-205ENST00000393357 RAPGEF3O95398 923 aa19.7■□□□□ 0.74
PHTF1-205ENST00000393357 LUZP1Q86V48 1076 aa19.7■□□□□ 0.74
PHTF1-205ENST00000393357 ARHGAP45Q92619 1136 aa19.7■□□□□ 0.74
PHTF1-205ENST00000393357 NRBP1Q9UHY1 535 aa19.7■□□□□ 0.74
PHTF1-205ENST00000393357 HMMRO75330 724 aa19.69■□□□□ 0.74
PHTF1-205ENST00000393357 MX1P20591 662 aa19.69■□□□□ 0.74
PHTF1-205ENST00000393357 RPAP2Q8IXW5 612 aaPredicted RBP19.69■□□□□ 0.74
PHTF1-205ENST00000393357 TFIP11Q9UBB9 837 aaKnown RBP19.69■□□□□ 0.74
PHTF1-205ENST00000393357 SMC3Q9UQE7 1217 aa19.69■□□□□ 0.74
PHTF1-205ENST00000393357 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
PHTF1-205ENST00000393357 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
PHTF1-205ENST00000393357 A0A087WWV3 80 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms