RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 DDX11Q96FC9 970 aa15.28■□□□□ 0.04
ABCA3-202ENST00000382381 CCDC7Q96M83 1385 aa15.28■□□□□ 0.04
ABCA3-202ENST00000382381 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
ABCA3-202ENST00000382381 TAF3Q5VWG9 929 aa15.28■□□□□ 0.04
ABCA3-202ENST00000382381 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
ABCA3-202ENST00000382381 NBPF8Q3BBV2 869 aa15.27■□□□□ 0.04
ABCA3-202ENST00000382381 ZNF530Q6P9A1 599 aaPredicted RBP15.27■□□□□ 0.04
ABCA3-202ENST00000382381 TNMDQ9H2S6 317 aa15.27■□□□□ 0.04
ABCA3-202ENST00000382381 CCDC69A6NI79 296 aa15.27■□□□□ 0.04
ABCA3-202ENST00000382381 MPHOSPH8Q99549 860 aa15.27■□□□□ 0.04
ABCA3-202ENST00000382381 TRMT1LQ7Z2T5 733 aaKnown RBP15.27■□□□□ 0.03
ABCA3-202ENST00000382381 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.03
ABCA3-202ENST00000382381 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.03
ABCA3-202ENST00000382381 SKAP1Q86WV1 359 aa15.27■□□□□ 0.03
ABCA3-202ENST00000382381 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.03
ABCA3-202ENST00000382381 DHX8Q14562 1220 aaKnown RBP15.26■□□□□ 0.03
ABCA3-202ENST00000382381 AACSQ86V21 672 aa15.26■□□□□ 0.03
ABCA3-202ENST00000382381 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
ABCA3-202ENST00000382381 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
ABCA3-202ENST00000382381 PPP2R1AP30153 589 aa15.26■□□□□ 0.03
ABCA3-202ENST00000382381 DCTN1Q14203 1278 aa15.26■□□□□ 0.03
ABCA3-202ENST00000382381 SSR1P43307 286 aaKnown RBP15.26■□□□□ 0.03
ABCA3-202ENST00000382381 LARP1BQ659C4 914 aaKnown RBP15.26■□□□□ 0.03
ABCA3-202ENST00000382381 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
ABCA3-202ENST00000382381 CCDC181Q5TID7 509 aa15.26■□□□□ 0.03
ABCA3-202ENST00000382381 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
ABCA3-202ENST00000382381 ZNF396Q96N95 335 aaPredicted RBP15.25■□□□□ 0.03
ABCA3-202ENST00000382381 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
ABCA3-202ENST00000382381 ZNHIT6Q9NWK9 470 aaKnown RBP15.25■□□□□ 0.03
ABCA3-202ENST00000382381 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
ABCA3-202ENST00000382381 SEPT7Q16181 437 aaKnown RBP15.25■□□□□ 0.03
ABCA3-202ENST00000382381 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
ABCA3-202ENST00000382381 CAMK4Q16566 473 aa15.25■□□□□ 0.03
ABCA3-202ENST00000382381 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
ABCA3-202ENST00000382381 FERMT3Q86UX7 667 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 ABCF2Q9UG63 623 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 RDXP35241 583 aaKnown RBP15.24■□□□□ 0.03
ABCA3-202ENST00000382381 CCDC82Q8N4S0 544 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 IDH1O75874 414 aaKnown RBP15.24■□□□□ 0.03
ABCA3-202ENST00000382381 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
ABCA3-202ENST00000382381 TDO2P48775 406 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 NUTM1Q86Y26 1132 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 SRGAP3O43295 1099 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 LRRCC1Q9C099 1032 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
ABCA3-202ENST00000382381 CCDC57Q2TAC2 916 aa15.23■□□□□ 0.03
ABCA3-202ENST00000382381 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
ABCA3-202ENST00000382381 JAKMIP1Q96N16 626 aaKnown RBP15.23■□□□□ 0.03
ABCA3-202ENST00000382381 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
ABCA3-202ENST00000382381 PDCP20941 246 aa15.23■□□□□ 0.03
ABCA3-202ENST00000382381 DNA2P51530 1060 aa15.23■□□□□ 0.03
ABCA3-202ENST00000382381 SOGA3Q5TF21 947 aa15.23■□□□□ 0.03
ABCA3-202ENST00000382381 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
ABCA3-202ENST00000382381 RPGRIP1LQ68CZ1 1315 aa15.22■□□□□ 0.03
ABCA3-202ENST00000382381 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
ABCA3-202ENST00000382381 MPHOSPH10O00566 681 aaKnown RBP15.22■□□□□ 0.03
ABCA3-202ENST00000382381 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
ABCA3-202ENST00000382381 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.22■□□□□ 0.03
ABCA3-202ENST00000382381 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
ABCA3-202ENST00000382381 CCDC97Q96F63 343 aaPredicted RBP15.22■□□□□ 0.03
ABCA3-202ENST00000382381 MYO6Q9UM54 1294 aa15.22■□□□□ 0.03
ABCA3-202ENST00000382381 ERICH4A6NGS2 130 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 PTCD1O75127 700 aaKnown RBP15.21■□□□□ 0.03
ABCA3-202ENST00000382381 MBD3O95983 291 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 TMX1Q9H3N1 280 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
ABCA3-202ENST00000382381 LEKR1Q6ZMV7 388 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 PPFIA3O75145 1194 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 RABEP1Q15276 862 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
ABCA3-202ENST00000382381 ZNF76P36508 570 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 LRP2BPQ9P2M1 347 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
ABCA3-202ENST00000382381 GUCY1B3Q02153 619 aa15.19■□□□□ 0.02
ABCA3-202ENST00000382381 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
ABCA3-202ENST00000382381 ADGRF5Q8IZF2 1346 aa15.19■□□□□ 0.02
ABCA3-202ENST00000382381 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
ABCA3-202ENST00000382381 SPATA32Q96LK8 384 aa15.19■□□□□ 0.02
ABCA3-202ENST00000382381 GOLGA6L10A6NI86 522 aa15.19■□□□□ 0.02
ABCA3-202ENST00000382381 SLC4A8Q2Y0W8 1093 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 UBAC1Q9BSL1 405 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 KLHL10Q6JEL2 608 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 CWC15Q9P013 229 aaKnown RBP15.18■□□□□ 0.02
ABCA3-202ENST00000382381 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
ABCA3-202ENST00000382381 ERC1Q8IUD2 1116 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 ANKRD30BQ9BXX2 1392 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 HIP1O00291 1037 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 KRT85P78386 507 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 JMYQ8N9B5 988 aa15.18■□□□□ 0.02
ABCA3-202ENST00000382381 CCDC112Q8NEF3 446 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms