RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 CALCOCO1Q9P1Z2 691 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 HTATSF1O43719 755 aaKnown RBP4.31□□□□□ -1.72
PRKD3-202ENST00000379066 BAG6P46379 1132 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 DDX54Q8TDD1 881 aaKnown RBP4.31□□□□□ -1.72
PRKD3-202ENST00000379066 ARHGEF10LQ9HCE6 1279 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 FEZ2Q9UHY8 353 aaPredicted RBP4.31□□□□□ -1.72
PRKD3-202ENST00000379066 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.31□□□□□ -1.72
PRKD3-202ENST00000379066 RIMBP3CA6NJZ7 1639 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 RIMBP3BA6NNM3 1639 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 RIMBP3Q9UFD9 1639 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 CHD1O14646 1710 aa4.31□□□□□ -1.72
PRKD3-202ENST00000379066 IPO5O00410 1097 aaKnown RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 CTAGE5O15320 804 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 SETSIPP0DME0 302 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 ERCC3P19447 782 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 PHC3Q8NDX5 983 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 FMNL2Q96PY5 1086 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 G3BP2Q9UN86 482 aaKnown RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 V9GYY5 206 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 MINK1Q8N4C8 1332 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 KIF16BQ96L93 1317 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 SCAPERQ9BY12 1400 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 TNPO1Q92973 898 aaKnown RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 ASXL2Q76L83 1435 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 FAM135AQ9P2D6 1515 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 FBXO41Q8TF61 875 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 OATP04181 439 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 TAX1BP1Q86VP1 789 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 MAF1Q9H063 256 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 DEF6Q9H4E7 631 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 PBRM1Q86U86 1689 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 POLA1P09884 1462 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 ZRANB2O95218 330 aaKnown RBP eCLIP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 CASQ1P31415 396 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 SART3Q15020 963 aaKnown RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 C22orf23Q9BZE7 217 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 PICK1Q9NRD5 415 aa4.3□□□□□ -1.72
PRKD3-202ENST00000379066 DENND4BO75064 1496 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-202ENST00000379066 FAM177BA6PVY3 158 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 NEFHP12036 1026 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 ZC3H12AQ5D1E8 599 aaKnown RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 DUSP27Q5VZP5 1158 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 PMFBP1Q8TBY8 1022 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 CARD11Q9BXL7 1154 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 TRAK1Q9UPV9 953 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 URB2Q14146 1524 aaKnown RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 TTC19Q6DKK2 380 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 GIMAP6Q6P9H5 292 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 FAM184AQ8NB25 1140 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 USP21Q9UK80 565 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 GRIN2AQ12879 1464 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 CCDC189A1A4V9 331 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 XBP1P17861 261 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 CHAF1AQ13111 956 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 STK32BQ9NY57 414 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 ADGRL1O94910 1474 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 CCDC175P0C221 793 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 CC2D1AQ6P1N0 951 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 ABTB2Q8N961 1025 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 TAF4BQ92750 862 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 AFAP1Q8N556 730 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 KLHL23Q8NBE8 558 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 KNSTRNQ9Y448 316 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 NUP155O75694 1391 aa4.29□□□□□ -1.72
PRKD3-202ENST00000379066 LRPPRCP42704 1394 aaKnown RBP4.29□□□□□ -1.72
PRKD3-202ENST00000379066 ICE2Q659A1 982 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 CCDC91Q7Z6B0 441 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 ZNF396Q96N95 335 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-202ENST00000379066 PRDM11Q9NQV5 511 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 CHCHD3Q9NX63 227 aaKnown RBP4.28□□□□□ -1.72
PRKD3-202ENST00000379066 NUDCQ9Y266 331 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 ARHGEF11O15085 1522 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 WDR62O43379 1518 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 ELL2O00472 640 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-202ENST00000379066 NFXL1Q6ZNB6 911 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 CADPS2Q86UW7 1296 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 KIF2CQ99661 725 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 ZNF232Q9UNY5 417 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 BICDL1Q6ZP65 573 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 PANK2Q9BZ23 570 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 DYNC1I1O14576 645 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 COQ9O75208 318 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 C1orf131Q8NDD1 294 aaKnown RBP4.28□□□□□ -1.72
PRKD3-202ENST00000379066 AK7Q96M32 723 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 SENP3-EIF4A1A0A087X0R7 540 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 ARMC3Q5W041 872 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 CTR9Q6PD62 1173 aa4.28□□□□□ -1.72
PRKD3-202ENST00000379066 ERCC4Q92889 916 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-202ENST00000379066 CFTRP13569 1480 aa4.28□□□□□ -1.73
PRKD3-202ENST00000379066 PARNO95453 639 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 FAM160A1Q05DH4 1040 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 MYLK4Q86YV6 388 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 RSPH1Q8WYR4 309 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 WDR7Q9Y4E6 1490 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms