RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 TTC31Q49AM3 519 aaPredicted RBP13.27□□□□□ -0.28
ITM2B-202ENST00000378565 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.28
ITM2B-202ENST00000378565 KDM4AO75164 1064 aa13.27□□□□□ -0.29
ITM2B-202ENST00000378565 STK3Q13188 491 aa13.27□□□□□ -0.29
ITM2B-202ENST00000378565 CAMK4Q16566 473 aa13.27□□□□□ -0.29
ITM2B-202ENST00000378565 ZSCAN31Q96LW9 406 aaPredicted RBP13.27□□□□□ -0.29
ITM2B-202ENST00000378565 ANO10Q9NW15 660 aa13.27□□□□□ -0.29
ITM2B-202ENST00000378565 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
ITM2B-202ENST00000378565 ALS2CR12Q96Q35 445 aa13.27□□□□□ -0.29
ITM2B-202ENST00000378565 SPECC1Q5M775 1068 aa13.26□□□□□ -0.29
ITM2B-202ENST00000378565 ARFGAP3Q9NP61 516 aa13.26□□□□□ -0.29
ITM2B-202ENST00000378565 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
ITM2B-202ENST00000378565 IKQ13123 557 aaPredicted RBP13.26□□□□□ -0.29
ITM2B-202ENST00000378565 PPP1R12BO60237 982 aaPredicted RBP13.26□□□□□ -0.29
ITM2B-202ENST00000378565 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.26□□□□□ -0.29
ITM2B-202ENST00000378565 GNAI2P04899 355 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
ITM2B-202ENST00000378565 ANAPC15P60006 121 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 SNW1Q13573 536 aaKnown RBP13.25□□□□□ -0.29
ITM2B-202ENST00000378565 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 FAM114A1Q8IWE2 563 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
ITM2B-202ENST00000378565 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
ITM2B-202ENST00000378565 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 CTAGE5O15320 804 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
ITM2B-202ENST00000378565 CAVIN2O95810 425 aa13.24□□□□□ -0.29
ITM2B-202ENST00000378565 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC94Q9BW85 323 aaPredicted RBP13.24□□□□□ -0.29
ITM2B-202ENST00000378565 CEP131Q9UPN4 1083 aa13.24□□□□□ -0.29
ITM2B-202ENST00000378565 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
ITM2B-202ENST00000378565 SCAPERQ9BY12 1400 aa13.24□□□□□ -0.29
ITM2B-202ENST00000378565 NSRP1Q9H0G5 558 aaKnown RBP13.24□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
ITM2B-202ENST00000378565 HLTFQ14527 1009 aaKnown RBP eCLIP13.24□□□□□ -0.29
ITM2B-202ENST00000378565 ZHX3Q9H4I2 956 aa13.24□□□□□ -0.29
ITM2B-202ENST00000378565 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
ITM2B-202ENST00000378565 BLOC1S2Q6QNY1 142 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 KRT32Q14532 448 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 EHBP1Q8NDI1 1231 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 NUP88Q99567 741 aaPredicted RBP13.23□□□□□ -0.29
ITM2B-202ENST00000378565 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 CEP83Q9Y592 693 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 EFCAB2Q5VUJ9 269 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 SETSIPP0DME0 302 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 FKBP15Q5T1M5 1219 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 RSRC1Q96IZ7 334 aaKnown RBP13.23□□□□□ -0.29
ITM2B-202ENST00000378565 MAATS1Q7Z4T9 603 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
ITM2B-202ENST00000378565 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
ITM2B-202ENST00000378565 SAMD1Q6SPF0 538 aaPredicted RBP13.22□□□□□ -0.29
ITM2B-202ENST00000378565 WASF1Q92558 559 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 RSPH14Q9UHP6 348 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 MTMR7Q9Y216 660 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CLCN1P35523 988 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 ADCY5O95622 1261 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 DDX23Q9BUQ8 820 aaKnown RBP13.22□□□□□ -0.29
ITM2B-202ENST00000378565 HSF2BPO75031 334 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC160A6NGH7 325 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CEP57Q86XR8 500 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 FBF1Q8TES7 1133 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 CCDC6Q16204 474 aa13.22□□□□□ -0.29
ITM2B-202ENST00000378565 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
ITM2B-202ENST00000378565 TRMT1Q9NXH9 659 aaKnown RBP13.21□□□□□ -0.29
ITM2B-202ENST00000378565 FSD2A1L4K1 749 aa13.21□□□□□ -0.29
ITM2B-202ENST00000378565 STX1AQ16623 288 aa13.21□□□□□ -0.29
ITM2B-202ENST00000378565 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
ITM2B-202ENST00000378565 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.29
ITM2B-202ENST00000378565 WIZO95785 1651 aa13.21□□□□□ -0.29
ITM2B-202ENST00000378565 NAP1L3Q99457 506 aaPredicted RBP13.21□□□□□ -0.29
ITM2B-202ENST00000378565 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.3
ITM2B-202ENST00000378565 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.3
ITM2B-202ENST00000378565 C1orf115Q9H7X2 142 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 USP25Q9UHP3 1055 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 FGFR1OPO95684 399 aaKnown RBP13.2□□□□□ -0.3
ITM2B-202ENST00000378565 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 YEATS4O95619 227 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
ITM2B-202ENST00000378565 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
ITM2B-202ENST00000378565 TRIM21P19474 475 aaKnown RBP13.2□□□□□ -0.3
ITM2B-202ENST00000378565 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.33e-7■□□□□ 8
ITM2B-202ENST00000378565 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
ITM2B-202ENST00000378565 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
ITM2B-202ENST00000378565 FHOD3Q2V2M9 1422 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 NEBLO76041 1014 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
ITM2B-202ENST00000378565 CAPN2P17655 700 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 EBAG9O00559 213 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms