RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 NCAPD2Q15021 1401 aa24.82■■□□□ 1.56
COMMD6-202ENST00000377612 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
COMMD6-202ENST00000377612 USHBP1Q8N6Y0 703 aa24.82■■□□□ 1.56
COMMD6-202ENST00000377612 HSP90AB2PQ58FF8 381 aa24.81■■□□□ 1.56
COMMD6-202ENST00000377612 NBPF6Q5VWK0 638 aa24.81■■□□□ 1.56
COMMD6-202ENST00000377612 NBPF4Q96M43 638 aa24.81■■□□□ 1.56
COMMD6-202ENST00000377612 EMILIN1Q9Y6C2 1016 aa24.81■■□□□ 1.56
COMMD6-202ENST00000377612 NBPF14Q5TI25 921 aa24.8■■□□□ 1.56
COMMD6-202ENST00000377612 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
COMMD6-202ENST00000377612 TAF1LQ8IZX4 1826 aa24.79■■□□□ 1.56
COMMD6-202ENST00000377612 NSD2O96028 1365 aa24.79■■□□□ 1.56
COMMD6-202ENST00000377612 TXNRD1Q16881 649 aa24.78■■□□□ 1.56
COMMD6-202ENST00000377612 DDX54Q8TDD1 881 aaKnown RBP24.76■■□□□ 1.55
COMMD6-202ENST00000377612 PDGFDQ9GZP0 370 aaPredicted RBP24.76■■□□□ 1.55
COMMD6-202ENST00000377612 COL24A1Q17RW2 1714 aa24.75■■□□□ 1.55
COMMD6-202ENST00000377612 CGNL1Q0VF96 1302 aa24.75■■□□□ 1.55
COMMD6-202ENST00000377612 C5P01031 1676 aa24.75■■□□□ 1.55
COMMD6-202ENST00000377612 ZCRB1Q8TBF4 217 aaKnown RBP24.71■■□□□ 1.55
COMMD6-202ENST00000377612 VIRMAQ69YN4 1812 aaKnown RBP24.7■■□□□ 1.54
COMMD6-202ENST00000377612 PANK3Q9H999 370 aa24.68■■□□□ 1.54
COMMD6-202ENST00000377612 LRRC4BQ9NT99 713 aa24.68■■□□□ 1.54
COMMD6-202ENST00000377612 POLKQ9UBT6 870 aa24.68■■□□□ 1.54
COMMD6-202ENST00000377612 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
COMMD6-202ENST00000377612 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
COMMD6-202ENST00000377612 SLC15A2Q16348 729 aa24.66■■□□□ 1.54
COMMD6-202ENST00000377612 RAPGEF4Q8WZA2 1011 aa24.66■■□□□ 1.54
COMMD6-202ENST00000377612 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
COMMD6-202ENST00000377612 ZNF827Q17R98 1081 aa24.65■■□□□ 1.54
COMMD6-202ENST00000377612 TATP17735 454 aaPredicted RBP24.64■■□□□ 1.54
COMMD6-202ENST00000377612 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.54
COMMD6-202ENST00000377612 STK32BQ9NY57 414 aa24.64■■□□□ 1.54
COMMD6-202ENST00000377612 KIF7Q2M1P5 1343 aa24.63■■□□□ 1.53
COMMD6-202ENST00000377612 SPON1Q9HCB6 807 aa24.63■■□□□ 1.53
COMMD6-202ENST00000377612 PCDH11XQ9BZA7 1347 aa24.62■■□□□ 1.53
COMMD6-202ENST00000377612 PCDH11YQ9BZA8 1340 aa24.62■■□□□ 1.53
COMMD6-202ENST00000377612 SYTL4Q96C24 671 aaPredicted RBP24.62■■□□□ 1.53
COMMD6-202ENST00000377612 CYP27B1O15528 508 aa24.61■■□□□ 1.53
COMMD6-202ENST00000377612 ZBTB7AO95365 584 aa24.61■■□□□ 1.53
COMMD6-202ENST00000377612 EYA1Q99502 592 aa24.61■■□□□ 1.53
COMMD6-202ENST00000377612 UBR3Q6ZT12 1888 aa24.61■■□□□ 1.53
COMMD6-202ENST00000377612 KCNQ4P56696 695 aa24.6■■□□□ 1.53
COMMD6-202ENST00000377612 EIF4A2Q14240 407 aaKnown RBP24.59■■□□□ 1.53
COMMD6-202ENST00000377612 PTGER2P43116 358 aa24.58■■□□□ 1.53
COMMD6-202ENST00000377612 C4BP0C0L5 1744 aa24.58■■□□□ 1.52
COMMD6-202ENST00000377612 AKT1S1Q96B36 256 aa24.57■■□□□ 1.52
COMMD6-202ENST00000377612 SLC27A3Q5K4L6 730 aa24.55■■□□□ 1.52
COMMD6-202ENST00000377612 IGSF1Q8N6C5 1336 aa24.55■■□□□ 1.52
COMMD6-202ENST00000377612 SCN11AQ9UI33 1791 aa24.54■■□□□ 1.52
COMMD6-202ENST00000377612 SGIP1Q9BQI5 828 aa24.54■■□□□ 1.52
COMMD6-202ENST00000377612 ATF5Q9Y2D1 282 aaPredicted RBP24.54■■□□□ 1.52
COMMD6-202ENST00000377612 AMER1Q5JTC6 1135 aaPredicted RBP24.53■■□□□ 1.52
COMMD6-202ENST00000377612 COL5A3P25940 1745 aaPredicted RBP24.52■■□□□ 1.52
COMMD6-202ENST00000377612 PPP1R1BQ9UD71 204 aaPredicted RBP24.52■■□□□ 1.52
COMMD6-202ENST00000377612 PNPLA7Q6ZV29 1317 aa24.52■■□□□ 1.52
COMMD6-202ENST00000377612 MTFR1LQ9H019 292 aa24.5■■□□□ 1.51
COMMD6-202ENST00000377612 CCNL1Q9UK58 526 aaPredicted RBP24.5■■□□□ 1.51
COMMD6-202ENST00000377612 PALLDQ8WX93 1383 aa24.5■■□□□ 1.51
COMMD6-202ENST00000377612 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
COMMD6-202ENST00000377612 NKX1-1Q15270 411 aaPredicted RBP24.49■■□□□ 1.51
COMMD6-202ENST00000377612 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
COMMD6-202ENST00000377612 PLEKHG2Q9H7P9 1386 aa24.48■■□□□ 1.51
COMMD6-202ENST00000377612 MPRIPQ6WCQ1 1025 aa24.47■■□□□ 1.51
COMMD6-202ENST00000377612 KNSTRNQ9Y448 316 aa24.47■■□□□ 1.51
COMMD6-202ENST00000377612 CHD4Q14839 1912 aa24.46■■□□□ 1.51
COMMD6-202ENST00000377612 PHKG2P15735 406 aa24.46■■□□□ 1.51
COMMD6-202ENST00000377612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.46■■□□□ 1.51
COMMD6-202ENST00000377612 SPG7Q9UQ90 795 aa24.46■■□□□ 1.51
COMMD6-202ENST00000377612 KDM6AO15550 1401 aaPredicted RBP24.45■■□□□ 1.51
COMMD6-202ENST00000377612 PER1O15534 1290 aaPredicted RBP24.45■■□□□ 1.5
COMMD6-202ENST00000377612 AEBP1Q8IUX7 1158 aa24.45■■□□□ 1.5
COMMD6-202ENST00000377612 PIGBQ92521 554 aa24.44■■□□□ 1.5
COMMD6-202ENST00000377612 COL3A1P02461 1466 aaPredicted RBP24.44■■□□□ 1.5
COMMD6-202ENST00000377612 ADAMTS7Q9UKP4 1686 aa24.43■■□□□ 1.5
COMMD6-202ENST00000377612 KDRP35968 1356 aa24.42■■□□□ 1.5
COMMD6-202ENST00000377612 MYH14Q7Z406 1995 aaKnown RBP24.42■■□□□ 1.5
COMMD6-202ENST00000377612 TJP1Q07157 1748 aa24.42■■□□□ 1.5
COMMD6-202ENST00000377612 CICQ96RK0 1608 aaPredicted RBP24.42■■□□□ 1.5
COMMD6-202ENST00000377612 C4AP0C0L4 1744 aa24.41■■□□□ 1.5
COMMD6-202ENST00000377612 TFCP2L1Q9NZI6 479 aa24.41■■□□□ 1.5
COMMD6-202ENST00000377612 UTRNP46939 3433 aa24.4■■□□□ 1.5
COMMD6-202ENST00000377612 IFNL2Q8IZJ0 200 aa24.4■■□□□ 1.5
COMMD6-202ENST00000377612 FHDC1Q9C0D6 1143 aaPredicted RBP24.4■■□□□ 1.5
COMMD6-202ENST00000377612 IL13P35225 146 aa24.39■■□□□ 1.49
COMMD6-202ENST00000377612 AMIGO3Q86WK7 504 aa24.38■■□□□ 1.49
COMMD6-202ENST00000377612 MAP3K5Q99683 1374 aa24.38■■□□□ 1.49
COMMD6-202ENST00000377612 COL23A1Q86Y22 540 aaPredicted RBP24.37■■□□□ 1.49
COMMD6-202ENST00000377612 CC2D1BQ5T0F9 858 aaKnown RBP24.36■■□□□ 1.49
COMMD6-202ENST00000377612 ARXQ96QS3 562 aa24.36■■□□□ 1.49
COMMD6-202ENST00000377612 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
COMMD6-202ENST00000377612 SIPA1L3O60292 1781 aaPredicted RBP24.35■■□□□ 1.49
COMMD6-202ENST00000377612 NPC1L1Q9UHC9 1359 aa24.35■■□□□ 1.49
COMMD6-202ENST00000377612 SLC16A10Q8TF71 515 aa24.35■■□□□ 1.49
COMMD6-202ENST00000377612 SMARCC1Q92922 1105 aaPredicted RBP24.35■■□□□ 1.49
COMMD6-202ENST00000377612 SYT17Q9BSW7 474 aa24.35■■□□□ 1.49
COMMD6-202ENST00000377612 ASAP1Q9ULH1 1129 aa24.35■■□□□ 1.49
COMMD6-202ENST00000377612 SULT6B1Q6IMI4 303 aa24.34■■□□□ 1.49
COMMD6-202ENST00000377612 MRC1P22897 1456 aa24.33■■□□□ 1.49
COMMD6-202ENST00000377612 MTHFSP49914 203 aa24.33■■□□□ 1.49
COMMD6-202ENST00000377612 ZNF530Q6P9A1 599 aaPredicted RBP24.33■■□□□ 1.49
COMMD6-202ENST00000377612 UBR2Q8IWV8 1755 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms