RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.28
C9orf43-202ENST00000374165 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.28
C9orf43-202ENST00000374165 CCDC9Q9Y3X0 531 aaKnown RBP23.07■■□□□ 1.28
C9orf43-202ENST00000374165 IL2RBP14784 551 aa23.06■■□□□ 1.28
C9orf43-202ENST00000374165 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
C9orf43-202ENST00000374165 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
C9orf43-202ENST00000374165 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
C9orf43-202ENST00000374165 THUMPD2Q9BTF0 503 aaKnown RBP23.06■■□□□ 1.28
C9orf43-202ENST00000374165 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
C9orf43-202ENST00000374165 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.05■■□□□ 1.28
C9orf43-202ENST00000374165 VPS72Q15906 364 aa23.04■■□□□ 1.28
C9orf43-202ENST00000374165 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
C9orf43-202ENST00000374165 PLEKHO1Q53GL0 409 aaPredicted RBP23.04■■□□□ 1.28
C9orf43-202ENST00000374165 OVOS2A0A0G2JMS6 1433 aa23.04■■□□□ 1.28
C9orf43-202ENST00000374165 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
C9orf43-202ENST00000374165 PARP4Q9UKK3 1724 aaKnown RBP23.03■■□□□ 1.28
C9orf43-202ENST00000374165 AMOTQ4VCS5 1084 aa23.03■■□□□ 1.28
C9orf43-202ENST00000374165 ZNF530Q6P9A1 599 aaPredicted RBP23.03■■□□□ 1.28
C9orf43-202ENST00000374165 MCM10Q7L590 875 aa23.03■■□□□ 1.28
C9orf43-202ENST00000374165 NGEFQ8N5V2 710 aa23.02■■□□□ 1.28
C9orf43-202ENST00000374165 DISP2A7MBM2 1401 aa23.02■■□□□ 1.28
C9orf43-202ENST00000374165 PKD1L3Q7Z443 1732 aa23.02■■□□□ 1.28
C9orf43-202ENST00000374165 WNK3Q9BYP7 1800 aa23.01■■□□□ 1.27
C9orf43-202ENST00000374165 CYP27B1O15528 508 aa23.01■■□□□ 1.27
C9orf43-202ENST00000374165 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
C9orf43-202ENST00000374165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.01■■□□□ 1.27
C9orf43-202ENST00000374165 SHANK3Q9BYB0 1731 aa23■■□□□ 1.27
C9orf43-202ENST00000374165 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
C9orf43-202ENST00000374165 ZCRB1Q8TBF4 217 aaKnown RBP22.99■■□□□ 1.27
C9orf43-202ENST00000374165 FAM98CQ17RN3 349 aaKnown RBP22.99■■□□□ 1.27
C9orf43-202ENST00000374165 IL17REQ8NFR9 667 aa22.99■■□□□ 1.27
C9orf43-202ENST00000374165 SPG7Q9UQ90 795 aa22.99■■□□□ 1.27
C9orf43-202ENST00000374165 THRAP3Q9Y2W1 955 aaKnown RBP22.99■■□□□ 1.27
C9orf43-202ENST00000374165 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
C9orf43-202ENST00000374165 LGR6Q9HBX8 967 aa22.98■■□□□ 1.27
C9orf43-202ENST00000374165 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
C9orf43-202ENST00000374165 GOLGA2Q08379 1002 aa22.98■■□□□ 1.27
C9orf43-202ENST00000374165 AKAP4Q5JQC9 854 aa22.98■■□□□ 1.27
C9orf43-202ENST00000374165 MPRIPQ6WCQ1 1025 aa22.98■■□□□ 1.27
C9orf43-202ENST00000374165 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
C9orf43-202ENST00000374165 GJD4Q96KN9 370 aaPredicted RBP22.97■■□□□ 1.27
C9orf43-202ENST00000374165 QTRT2Q9H974 415 aaKnown RBP22.97■■□□□ 1.27
C9orf43-202ENST00000374165 GLI3P10071 1580 aa22.97■■□□□ 1.27
C9orf43-202ENST00000374165 PHKG2P15735 406 aa22.96■■□□□ 1.27
C9orf43-202ENST00000374165 ILDR1Q86SU0 546 aaPredicted RBP22.96■■□□□ 1.27
C9orf43-202ENST00000374165 ATRNO75882 1429 aa22.96■■□□□ 1.27
C9orf43-202ENST00000374165 EP400Q96L91 3159 aa22.96■■□□□ 1.27
C9orf43-202ENST00000374165 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
C9orf43-202ENST00000374165 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
C9orf43-202ENST00000374165 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
C9orf43-202ENST00000374165 TRPC5Q9UL62 973 aaPredicted RBP22.96■■□□□ 1.27
C9orf43-202ENST00000374165 PLEKHG2Q9H7P9 1386 aa22.94■■□□□ 1.26
C9orf43-202ENST00000374165 LMOD3Q0VAK6 560 aa22.94■■□□□ 1.26
C9orf43-202ENST00000374165 RTF1Q92541 710 aaKnown RBP22.94■■□□□ 1.26
C9orf43-202ENST00000374165 SLFN5Q08AF3 891 aa22.94■■□□□ 1.26
C9orf43-202ENST00000374165 IFNL2Q8IZJ0 200 aa22.94■■□□□ 1.26
C9orf43-202ENST00000374165 HTATSF1O43719 755 aaKnown RBP22.92■■□□□ 1.26
C9orf43-202ENST00000374165 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
C9orf43-202ENST00000374165 RGS17Q9UGC6 210 aaPredicted RBP22.92■■□□□ 1.26
C9orf43-202ENST00000374165 PCDH11XQ9BZA7 1347 aa22.92■■□□□ 1.26
C9orf43-202ENST00000374165 PCDH11YQ9BZA8 1340 aa22.92■■□□□ 1.26
C9orf43-202ENST00000374165 EXOC5O00471 708 aa22.92■■□□□ 1.26
C9orf43-202ENST00000374165 KDM6AO15550 1401 aaPredicted RBP22.92■■□□□ 1.26
C9orf43-202ENST00000374165 LRRC37A3O60309 1634 aa22.91■■□□□ 1.26
C9orf43-202ENST00000374165 DUSP27Q5VZP5 1158 aa22.91■■□□□ 1.26
C9orf43-202ENST00000374165 TRMT2AQ8IZ69 625 aaKnown RBP22.91■■□□□ 1.26
C9orf43-202ENST00000374165 CEMIPQ8WUJ3 1361 aa22.91■■□□□ 1.26
C9orf43-202ENST00000374165 DDB1Q16531 1140 aa22.91■■□□□ 1.26
C9orf43-202ENST00000374165 TSR2Q969E8 191 aaKnown RBP22.91■■□□□ 1.26
C9orf43-202ENST00000374165 CDCA7Q9BWT1 371 aaPredicted RBP22.91■■□□□ 1.26
C9orf43-202ENST00000374165 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
C9orf43-202ENST00000374165 KAT6BQ8WYB5 2073 aa22.9■■□□□ 1.26
C9orf43-202ENST00000374165 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
C9orf43-202ENST00000374165 MIS18AQ9NYP9 233 aa22.9■■□□□ 1.26
C9orf43-202ENST00000374165 SCN11AQ9UI33 1791 aa22.9■■□□□ 1.26
C9orf43-202ENST00000374165 ADAMTS7Q9UKP4 1686 aa22.89■■□□□ 1.25
C9orf43-202ENST00000374165 TNS2Q63HR2 1409 aa22.88■■□□□ 1.25
C9orf43-202ENST00000374165 E9PSI1 815 aa22.88■■□□□ 1.25
C9orf43-202ENST00000374165 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
C9orf43-202ENST00000374165 A0A0G2JS52 829 aa22.87■■□□□ 1.25
C9orf43-202ENST00000374165 ZNF853P0CG23 659 aa22.87■■□□□ 1.25
C9orf43-202ENST00000374165 MYT1Q01538 1121 aa22.87■■□□□ 1.25
C9orf43-202ENST00000374165 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
C9orf43-202ENST00000374165 THSD7AQ9UPZ6 1657 aa22.87■■□□□ 1.25
C9orf43-202ENST00000374165 ONECUT3O60422 494 aaPredicted RBP22.87■■□□□ 1.25
C9orf43-202ENST00000374165 IL16Q14005 1332 aa22.87■■□□□ 1.25
C9orf43-202ENST00000374165 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
C9orf43-202ENST00000374165 MARCH10Q8NA82 808 aaPredicted RBP22.86■■□□□ 1.25
C9orf43-202ENST00000374165 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
C9orf43-202ENST00000374165 CFAP44Q96MT7 982 aa22.86■■□□□ 1.25
C9orf43-202ENST00000374165 FANCIQ9NVI1 1328 aa22.85■■□□□ 1.25
C9orf43-202ENST00000374165 MBIPQ9NS73 344 aa22.85■■□□□ 1.25
C9orf43-202ENST00000374165 CHL1O00533 1208 aa22.84■■□□□ 1.25
C9orf43-202ENST00000374165 IFT57Q9NWB7 429 aa22.84■■□□□ 1.25
C9orf43-202ENST00000374165 CALD1Q05682 793 aaKnown RBP22.84■■□□□ 1.25
C9orf43-202ENST00000374165 NFATC2IPQ8NCF5 419 aa22.84■■□□□ 1.25
C9orf43-202ENST00000374165 TOGARAM1Q9Y4F4 1720 aa22.83■■□□□ 1.25
C9orf43-202ENST00000374165 SIPA1L3O60292 1781 aaPredicted RBP22.83■■□□□ 1.24
C9orf43-202ENST00000374165 GNAI1P63096 354 aa22.82■■□□□ 1.24
C9orf43-202ENST00000374165 SEPT12Q8IYM1 358 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 533.7 ms