RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 AFF2P51816 1311 aa15.16■□□□□ 0.02
CALCOCO2-202ENST00000372317 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
CALCOCO2-202ENST00000372317 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
CALCOCO2-202ENST00000372317 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
CALCOCO2-202ENST00000372317 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
CALCOCO2-202ENST00000372317 SPATA31A1Q5TZJ5 1347 aa15.15■□□□□ 0.02
CALCOCO2-202ENST00000372317 SPATA31A5Q5VU36 1347 aa15.15■□□□□ 0.02
CALCOCO2-202ENST00000372317 SPATA31A7Q8IWB4 1347 aa15.15■□□□□ 0.02
CALCOCO2-202ENST00000372317 LRRC37A3O60309 1634 aa15.14■□□□□ 0.01
CALCOCO2-202ENST00000372317 MAP3K5Q99683 1374 aa15.14■□□□□ 0.01
CALCOCO2-202ENST00000372317 DLG5Q8TDM6 1919 aa15.14■□□□□ 0.01
CALCOCO2-202ENST00000372317 RIPK4P57078 832 aa15.14■□□□□ 0.01
CALCOCO2-202ENST00000372317 USP21Q9UK80 565 aa15.14■□□□□ 0.01
CALCOCO2-202ENST00000372317 IL2RBP14784 551 aa15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 PLEKHO1Q53GL0 409 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 ZNF530Q6P9A1 599 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
CALCOCO2-202ENST00000372317 ATRNO75882 1429 aa15.12■□□□□ 0.01
CALCOCO2-202ENST00000372317 LMOD3Q0VAK6 560 aa15.12■□□□□ 0.01
CALCOCO2-202ENST00000372317 VPS72Q15906 364 aa15.12■□□□□ 0.01
CALCOCO2-202ENST00000372317 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
CALCOCO2-202ENST00000372317 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
CALCOCO2-202ENST00000372317 GLI3P10071 1580 aa15.11■□□□□ 0.01
CALCOCO2-202ENST00000372317 TNS2Q63HR2 1409 aa15.11■□□□□ 0.01
CALCOCO2-202ENST00000372317 AMOTQ4VCS5 1084 aa15.11■□□□□ 0.01
CALCOCO2-202ENST00000372317 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
CALCOCO2-202ENST00000372317 SPG7Q9UQ90 795 aa15.1■□□□□ 0.01
CALCOCO2-202ENST00000372317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.09■□□□□ 0.014e-12■□□□□ 8.2
CALCOCO2-202ENST00000372317 PCDH11XQ9BZA7 1347 aa15.09■□□□□ 0.01
CALCOCO2-202ENST00000372317 PCDH11YQ9BZA8 1340 aa15.09■□□□□ 0.01
CALCOCO2-202ENST00000372317 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
CALCOCO2-202ENST00000372317 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
CALCOCO2-202ENST00000372317 DCTN1Q14203 1278 aa15.08■□□□□ 0
CALCOCO2-202ENST00000372317 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
CALCOCO2-202ENST00000372317 MCM10Q7L590 875 aa15.08■□□□□ 0
CALCOCO2-202ENST00000372317 CDCA7LQ96GN5 454 aa15.08■□□□□ 0
CALCOCO2-202ENST00000372317 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0
CALCOCO2-202ENST00000372317 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
CALCOCO2-202ENST00000372317 KDM6AO15550 1401 aaPredicted RBP15.08■□□□□ 0
CALCOCO2-202ENST00000372317 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
CALCOCO2-202ENST00000372317 GOLGA2Q08379 1002 aa15.07■□□□□ 0
CALCOCO2-202ENST00000372317 PDE3BQ13370 1112 aa15.07■□□□□ 0
CALCOCO2-202ENST00000372317 AKAP4Q5JQC9 854 aa15.07■□□□□ 0
CALCOCO2-202ENST00000372317 BARGINQ6ZT62 677 aa15.07■□□□□ 0
CALCOCO2-202ENST00000372317 ZCRB1Q8TBF4 217 aaKnown RBP15.07■□□□□ 0
CALCOCO2-202ENST00000372317 CYP27B1O15528 508 aa15.06■□□□□ 0
CALCOCO2-202ENST00000372317 PHKG2P15735 406 aa15.06■□□□□ 0
CALCOCO2-202ENST00000372317 WDR63Q8IWG1 891 aa15.06■□□□□ 0
CALCOCO2-202ENST00000372317 RTF1Q92541 710 aaKnown RBP15.06■□□□□ 0
CALCOCO2-202ENST00000372317 CDCA7Q9BWT1 371 aaPredicted RBP15.06■□□□□ 0
CALCOCO2-202ENST00000372317 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
CALCOCO2-202ENST00000372317 TRPC5Q9UL62 973 aaPredicted RBP15.06■□□□□ 0
CALCOCO2-202ENST00000372317 HTATSF1O43719 755 aaKnown RBP15.05■□□□□ -0
CALCOCO2-202ENST00000372317 FAM98CQ17RN3 349 aaKnown RBP15.05■□□□□ -0
CALCOCO2-202ENST00000372317 IL16Q14005 1332 aa15.05■□□□□ -0
CALCOCO2-202ENST00000372317 CEMIPQ8WUJ3 1361 aa15.05■□□□□ -0
CALCOCO2-202ENST00000372317 MRC1P22897 1456 aa15.05■□□□□ -0
CALCOCO2-202ENST00000372317 E9PSI1 815 aa15.04■□□□□ -0
CALCOCO2-202ENST00000372317 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
CALCOCO2-202ENST00000372317 SLFN5Q08AF3 891 aa15.04■□□□□ -0
CALCOCO2-202ENST00000372317 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
CALCOCO2-202ENST00000372317 IFNL2Q8IZJ0 200 aa15.04■□□□□ -0
CALCOCO2-202ENST00000372317 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
CALCOCO2-202ENST00000372317 IL17REQ8NFR9 667 aa15.03■□□□□ -0
CALCOCO2-202ENST00000372317 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
CALCOCO2-202ENST00000372317 SCN11AQ9UI33 1791 aa15.03■□□□□ -0
CALCOCO2-202ENST00000372317 FANCIQ9NVI1 1328 aa15.02■□□□□ -0
CALCOCO2-202ENST00000372317 A0A0G2JS52 829 aa15.02■□□□□ -0
CALCOCO2-202ENST00000372317 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
CALCOCO2-202ENST00000372317 MYT1Q01538 1121 aa15.02■□□□□ -0
CALCOCO2-202ENST00000372317 DDX54Q8TDD1 881 aaKnown RBP15.02■□□□□ -0
CALCOCO2-202ENST00000372317 IFT57Q9NWB7 429 aa15.02■□□□□ -0
CALCOCO2-202ENST00000372317 VIRMAQ69YN4 1812 aaKnown RBP15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 DDB1Q16531 1140 aa15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 ZNF772Q68DY9 489 aaPredicted RBP15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 TSR2Q969E8 191 aaKnown RBP15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 LGR6Q9HBX8 967 aa15.01□□□□□ -0.01
CALCOCO2-202ENST00000372317 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
CALCOCO2-202ENST00000372317 SIPA1L3O60292 1781 aaPredicted RBP15□□□□□ -0.01
CALCOCO2-202ENST00000372317 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
CALCOCO2-202ENST00000372317 EXOC5O00471 708 aa14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 GNAI1P63096 354 aa14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 ILDR1Q86SU0 546 aaPredicted RBP14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 TRMT2AQ8IZ69 625 aaKnown RBP14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 DCAF5Q96JK2 942 aa14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
CALCOCO2-202ENST00000372317 KDM3BQ7LBC6 1761 aa14.98□□□□□ -0.01
CALCOCO2-202ENST00000372317 TEFQ10587 303 aa14.98□□□□□ -0.01
CALCOCO2-202ENST00000372317 NKX1-1Q15270 411 aaPredicted RBP14.98□□□□□ -0.01
CALCOCO2-202ENST00000372317 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
CALCOCO2-202ENST00000372317 CHL1O00533 1208 aa14.96□□□□□ -0.01
CALCOCO2-202ENST00000372317 MARCH10Q8NA82 808 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms