RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 USP21Q9UK80 565 aa9.44□□□□□ -0.9
CSDE1-204ENST00000369530 FLT4P35916 1363 aa9.44□□□□□ -0.9
CSDE1-204ENST00000369530 NUP98P52948 1817 aa9.44□□□□□ -0.9
CSDE1-204ENST00000369530 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
CSDE1-204ENST00000369530 YTHDC1Q96MU7 727 aaKnown RBP9.44□□□□□ -0.9
CSDE1-204ENST00000369530 ADAMTSL1Q8N6G6 1762 aa9.43□□□□□ -0.9
CSDE1-204ENST00000369530 FER1L6Q2WGJ9 1857 aa9.43□□□□□ -0.9
CSDE1-204ENST00000369530 QTRT2Q9H974 415 aaKnown RBP9.43□□□□□ -0.9
CSDE1-204ENST00000369530 SNED1Q8TER0 1413 aa9.43□□□□□ -0.9
CSDE1-204ENST00000369530 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
CSDE1-204ENST00000369530 PKNOX2Q96KN3 472 aa9.43□□□□□ -0.9
CSDE1-204ENST00000369530 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
CSDE1-204ENST00000369530 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
CSDE1-204ENST00000369530 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
CSDE1-204ENST00000369530 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
CSDE1-204ENST00000369530 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
CSDE1-204ENST00000369530 RXRBP28702 533 aa9.41□□□□□ -0.9
CSDE1-204ENST00000369530 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
CSDE1-204ENST00000369530 POGKQ9P215 609 aa9.41□□□□□ -0.9
CSDE1-204ENST00000369530 IL13P35225 146 aa9.4□□□□□ -0.9
CSDE1-204ENST00000369530 CHD4Q14839 1912 aa9.4□□□□□ -0.9
CSDE1-204ENST00000369530 BTG4Q9NY30 223 aa9.4□□□□□ -0.91
CSDE1-204ENST00000369530 COL4A1P02462 1669 aa9.39□□□□□ -0.91
CSDE1-204ENST00000369530 PTF1AQ7RTS3 328 aa9.39□□□□□ -0.91
CSDE1-204ENST00000369530 PLSCR1O15162 318 aa9.39□□□□□ -0.91
CSDE1-204ENST00000369530 SENP3Q9H4L4 574 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-204ENST00000369530 PAPPA2Q9BXP8 1791 aa9.38□□□□□ -0.91
CSDE1-204ENST00000369530 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
CSDE1-204ENST00000369530 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
CSDE1-204ENST00000369530 SAFB2Q14151 953 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSDE1-204ENST00000369530 PLEKHF1Q96S99 279 aa9.38□□□□□ -0.91
CSDE1-204ENST00000369530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.911e-11■■□□□ 14.1
CSDE1-204ENST00000369530 TMF1P82094 1093 aa9.37□□□□□ -0.91
CSDE1-204ENST00000369530 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
CSDE1-204ENST00000369530 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 PHF23Q9BUL5 403 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-204ENST00000369530 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 C8orf37Q96NL8 207 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 PXDNLA1KZ92 1463 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 TCP11L2Q8N4U5 519 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
CSDE1-204ENST00000369530 ABTB2Q8N961 1025 aa9.34□□□□□ -0.91
CSDE1-204ENST00000369530 ARAP2Q8WZ64 1704 aa9.34□□□□□ -0.91
CSDE1-204ENST00000369530 CDCA7Q9BWT1 371 aaPredicted RBP9.34□□□□□ -0.92
CSDE1-204ENST00000369530 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
CSDE1-204ENST00000369530 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
CSDE1-204ENST00000369530 FBLN1P23142 703 aa9.32□□□□□ -0.92
CSDE1-204ENST00000369530 THSD7BQ9C0I4 1608 aa9.32□□□□□ -0.92
CSDE1-204ENST00000369530 CYP27B1O15528 508 aa9.32□□□□□ -0.92
CSDE1-204ENST00000369530 EIF4A2Q14240 407 aaKnown RBP9.32□□□□□ -0.92
CSDE1-204ENST00000369530 TERF2IPQ9NYB0 399 aa9.31□□□□□ -0.92
CSDE1-204ENST00000369530 IBTKQ9P2D0 1353 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-204ENST00000369530 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
CSDE1-204ENST00000369530 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
CSDE1-204ENST00000369530 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-204ENST00000369530 DUOX1Q9NRD9 1551 aa9.31□□□□□ -0.92
CSDE1-204ENST00000369530 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
CSDE1-204ENST00000369530 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
CSDE1-204ENST00000369530 MYH3P11055 1940 aa9.3□□□□□ -0.92
CSDE1-204ENST00000369530 PTGER2P43116 358 aa9.3□□□□□ -0.92
CSDE1-204ENST00000369530 NCBP3Q53F19 620 aaKnown RBP9.3□□□□□ -0.92
CSDE1-204ENST00000369530 LRP10Q7Z4F1 713 aa9.3□□□□□ -0.92
CSDE1-204ENST00000369530 BCANQ96GW7 911 aa9.3□□□□□ -0.92
CSDE1-204ENST00000369530 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
CSDE1-204ENST00000369530 KRT27Q7Z3Y8 459 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 NGDNQ8NEJ9 315 aaKnown RBP9.29□□□□□ -0.92
CSDE1-204ENST00000369530 PANK3Q9H999 370 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 LRRC4BQ9NT99 713 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 RIC1Q4ADV7 1423 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 ANKRD24Q8TF21 1146 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 TAF1P21675 1872 aa9.29□□□□□ -0.92
CSDE1-204ENST00000369530 EYA1Q99502 592 aa9.28□□□□□ -0.92
CSDE1-204ENST00000369530 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
CSDE1-204ENST00000369530 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
CSDE1-204ENST00000369530 NLRP6P59044 892 aa9.27□□□□□ -0.92
CSDE1-204ENST00000369530 CDCA8Q53HL2 280 aa9.27□□□□□ -0.92
CSDE1-204ENST00000369530 PODXL2Q9NZ53 605 aa9.27□□□□□ -0.93
CSDE1-204ENST00000369530 RSPH6AQ9H0K4 717 aa9.27□□□□□ -0.93
CSDE1-204ENST00000369530 ADCY9O60503 1353 aa9.27□□□□□ -0.93
CSDE1-204ENST00000369530 C10orf71Q711Q0 1435 aa9.26□□□□□ -0.93
CSDE1-204ENST00000369530 CCDC88AQ3V6T2 1871 aa9.26□□□□□ -0.93
CSDE1-204ENST00000369530 FAM98CQ17RN3 349 aaKnown RBP9.25□□□□□ -0.93
CSDE1-204ENST00000369530 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
CSDE1-204ENST00000369530 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
CSDE1-204ENST00000369530 HDGFL2Q7Z4V5 671 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-204ENST00000369530 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
CSDE1-204ENST00000369530 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-204ENST00000369530 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-204ENST00000369530 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-204ENST00000369530 PLEKHG5O94827 1062 aa9.24□□□□□ -0.93
CSDE1-204ENST00000369530 ZC3H6P61129 1189 aaKnown RBP9.24□□□□□ -0.93
CSDE1-204ENST00000369530 FAM196AQ6ZSG2 479 aa9.24□□□□□ -0.93
CSDE1-204ENST00000369530 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
CSDE1-204ENST00000369530 ECM29Q5VYK3 1845 aa9.24□□□□□ -0.93
CSDE1-204ENST00000369530 PHKG2P15735 406 aa9.23□□□□□ -0.93
CSDE1-204ENST00000369530 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
CSDE1-204ENST00000369530 IL2RBP14784 551 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms