RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 SLURP2P0DP57 97 aa11.21□□□□□ -0.61
RNU4-40P-201ENST00000364351 GSK3AP49840 483 aa11.21□□□□□ -0.61
RNU4-40P-201ENST00000364351 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
RNU4-40P-201ENST00000364351 A0A1W2PRU2 124 aa11.2□□□□□ -0.62
RNU4-40P-201ENST00000364351 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
RNU4-40P-201ENST00000364351 KCTD17Q8N5Z5 321 aa11.2□□□□□ -0.62
RNU4-40P-201ENST00000364351 RASSF7Q02833 373 aa11.19□□□□□ -0.62
RNU4-40P-201ENST00000364351 NR1H3Q13133 447 aa11.19□□□□□ -0.62
RNU4-40P-201ENST00000364351 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
RNU4-40P-201ENST00000364351 TMEM151AQ8N4L1 468 aa11.19□□□□□ -0.62
RNU4-40P-201ENST00000364351 RNF225M0QZC1 329 aaPredicted RBP11.18□□□□□ -0.62
RNU4-40P-201ENST00000364351 GDF11O95390 407 aa11.18□□□□□ -0.62
RNU4-40P-201ENST00000364351 ADAMTS2O95450 1211 aa11.18□□□□□ -0.62
RNU4-40P-201ENST00000364351 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
RNU4-40P-201ENST00000364351 GPC1P35052 558 aa11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 RIPOR1Q6ZS17 1223 aa11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 PCDHB11Q9Y5F2 797 aa11.17□□□□□ -0.62
RNU4-40P-201ENST00000364351 ARHGEF15O94989 841 aa11.16□□□□□ -0.62
RNU4-40P-201ENST00000364351 POU4F2Q12837 409 aa11.16□□□□□ -0.62
RNU4-40P-201ENST00000364351 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
RNU4-40P-201ENST00000364351 SCTRP47872 440 aa11.15□□□□□ -0.62
RNU4-40P-201ENST00000364351 MARSP56192 900 aaKnown RBP11.15□□□□□ -0.62
RNU4-40P-201ENST00000364351 SRSF11Q05519 484 aaKnown RBP11.15□□□□□ -0.62
RNU4-40P-201ENST00000364351 GAS6Q14393 721 aa11.15□□□□□ -0.62
RNU4-40P-201ENST00000364351 LYPD4Q6UWN0 246 aa11.15□□□□□ -0.62
RNU4-40P-201ENST00000364351 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
RNU4-40P-201ENST00000364351 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 TRIM22Q8IYM9 498 aa11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 MTMR14Q8NCE2 650 aa11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
RNU4-40P-201ENST00000364351 GPR25O00155 361 aa11.13□□□□□ -0.63
RNU4-40P-201ENST00000364351 DBN1Q16643 649 aa11.13□□□□□ -0.63
RNU4-40P-201ENST00000364351 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
RNU4-40P-201ENST00000364351 IRS1P35568 1242 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 CLN3Q13286 438 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 DYRK1BQ9Y463 629 aa11.12□□□□□ -0.63
RNU4-40P-201ENST00000364351 GRIP2Q9C0E4 1043 aa11.11□□□□□ -0.63
RNU4-40P-201ENST00000364351 OSBPL3Q9H4L5 887 aa11.11□□□□□ -0.63
RNU4-40P-201ENST00000364351 GPR37L1O60883 481 aa11.1□□□□□ -0.63
RNU4-40P-201ENST00000364351 CELA2BP08218 269 aaPredicted RBP11.1□□□□□ -0.63
RNU4-40P-201ENST00000364351 H7C1W4 665 aa11.09□□□□□ -0.63
RNU4-40P-201ENST00000364351 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
RNU4-40P-201ENST00000364351 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
RNU4-40P-201ENST00000364351 GTPBP3Q969Y2 492 aaKnown RBP11.09□□□□□ -0.63
RNU4-40P-201ENST00000364351 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
RNU4-40P-201ENST00000364351 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
RNU4-40P-201ENST00000364351 APBB1O00213 710 aa11.08□□□□□ -0.64
RNU4-40P-201ENST00000364351 SOCS7O14512 581 aa11.08□□□□□ -0.64
RNU4-40P-201ENST00000364351 TRAK2O60296 914 aa11.08□□□□□ -0.64
RNU4-40P-201ENST00000364351 SCARF2Q96GP6 870 aaPredicted RBP11.07□□□□□ -0.64
RNU4-40P-201ENST00000364351 TIMMDC1Q9NPL8 285 aa11.07□□□□□ -0.64
RNU4-40P-201ENST00000364351 IGF1RP08069 1367 aa11.06□□□□□ -0.64
RNU4-40P-201ENST00000364351 TRERF1Q96PN7 1200 aa11.06□□□□□ -0.64
RNU4-40P-201ENST00000364351 ENAMQ9NRM1 1142 aa11.06□□□□□ -0.64
RNU4-40P-201ENST00000364351 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
RNU4-40P-201ENST00000364351 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
RNU4-40P-201ENST00000364351 TAS1R3Q7RTX0 852 aa11.05□□□□□ -0.64
RNU4-40P-201ENST00000364351 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
RNU4-40P-201ENST00000364351 WASLO00401 505 aaPredicted RBP11.04□□□□□ -0.64
RNU4-40P-201ENST00000364351 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
RNU4-40P-201ENST00000364351 GNRH1P01148 92 aa11.04□□□□□ -0.64
RNU4-40P-201ENST00000364351 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
RNU4-40P-201ENST00000364351 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
RNU4-40P-201ENST00000364351 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
RNU4-40P-201ENST00000364351 CENPCQ03188 943 aa11.03□□□□□ -0.64
RNU4-40P-201ENST00000364351 SUZ12Q15022 739 aaKnown RBP11.03□□□□□ -0.64
RNU4-40P-201ENST00000364351 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
RNU4-40P-201ENST00000364351 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
RNU4-40P-201ENST00000364351 IL2RAP01589 272 aa11.02□□□□□ -0.65
RNU4-40P-201ENST00000364351 F11P03951 625 aa11.02□□□□□ -0.65
RNU4-40P-201ENST00000364351 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.65
RNU4-40P-201ENST00000364351 PHKA2P46019 1235 aa11.01□□□□□ -0.65
RNU4-40P-201ENST00000364351 GPAT2Q6NUI2 795 aa11.01□□□□□ -0.65
RNU4-40P-201ENST00000364351 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
RNU4-40P-201ENST00000364351 DNMT3AQ9Y6K1 912 aaPredicted RBP11.01□□□□□ -0.65
RNU4-40P-201ENST00000364351 BCRP11274 1271 aa11□□□□□ -0.65
RNU4-40P-201ENST00000364351 MX2P20592 715 aa11□□□□□ -0.65
RNU4-40P-201ENST00000364351 NEDD1Q8NHV4 660 aa11□□□□□ -0.65
RNU4-40P-201ENST00000364351 ACDQ96AP0 544 aa11□□□□□ -0.65
RNU4-40P-201ENST00000364351 ZSCAN10Q96SZ4 725 aaPredicted RBP11□□□□□ -0.65
RNU4-40P-201ENST00000364351 GPAMQ9HCL2 828 aa11□□□□□ -0.65
RNU4-40P-201ENST00000364351 TSGA10IPQ3SY00 556 aa10.98□□□□□ -0.65
RNU4-40P-201ENST00000364351 PRM3Q9NNZ6 103 aa10.98□□□□□ -0.65
RNU4-40P-201ENST00000364351 NSFL1CQ9UNZ2 370 aaKnown RBP10.98□□□□□ -0.65
RNU4-40P-201ENST00000364351 CNTNAP5Q8WYK1 1306 aa10.98□□□□□ -0.65
RNU4-40P-201ENST00000364351 GTF2E1P29083 439 aaPredicted RBP10.97□□□□□ -0.65
RNU4-40P-201ENST00000364351 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
RNU4-40P-201ENST00000364351 TMEM214Q6NUQ4 689 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms