RNA–Protein interactions for RNA: ENST00000358597.7

CELF1-202, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-202ENST00000358597 DISP2A7MBM2 1401 aa11.23□□□□□ -0.61
CELF1-202ENST00000358597 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
CELF1-202ENST00000358597 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
CELF1-202ENST00000358597 ATRNO75882 1429 aa11.22□□□□□ -0.61
CELF1-202ENST00000358597 GLI3P10071 1580 aa11.22□□□□□ -0.61
CELF1-202ENST00000358597 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
CELF1-202ENST00000358597 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
CELF1-202ENST00000358597 APAF1O14727 1248 aa11.21□□□□□ -0.61
CELF1-202ENST00000358597 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
CELF1-202ENST00000358597 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.61
CELF1-202ENST00000358597 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.61
CELF1-202ENST00000358597 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.61
CELF1-202ENST00000358597 MAPK8IP3Q9UPT6 1336 aa11.21□□□□□ -0.61
CELF1-202ENST00000358597 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.62
CELF1-202ENST00000358597 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.62
CELF1-202ENST00000358597 VPS72Q15906 364 aa11.21□□□□□ -0.62
CELF1-202ENST00000358597 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
CELF1-202ENST00000358597 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
CELF1-202ENST00000358597 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
CELF1-202ENST00000358597 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
CELF1-202ENST00000358597 USP35Q9P2H5 1018 aa11.2□□□□□ -0.62
CELF1-202ENST00000358597 ADAMTS7Q9UKP4 1686 aa11.19□□□□□ -0.62
CELF1-202ENST00000358597 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
CELF1-202ENST00000358597 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
CELF1-202ENST00000358597 NFE2L2Q16236 605 aa11.18□□□□□ -0.62
CELF1-202ENST00000358597 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
CELF1-202ENST00000358597 THRAP3Q9Y2W1 955 aaKnown RBP11.18□□□□□ -0.62
CELF1-202ENST00000358597 RRP7AQ9Y3A4 280 aaKnown RBP11.18□□□□□ -0.62
CELF1-202ENST00000358597 ZBED9Q6R2W3 1325 aa11.18□□□□□ -0.62
CELF1-202ENST00000358597 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
CELF1-202ENST00000358597 NEFMP07197 916 aa11.18□□□□□ -0.62
CELF1-202ENST00000358597 IL2RBP14784 551 aa11.18□□□□□ -0.62
CELF1-202ENST00000358597 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
CELF1-202ENST00000358597 RXRBP28702 533 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 RBM6P78332 1123 aaKnown RBP11.17□□□□□ -0.62
CELF1-202ENST00000358597 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
CELF1-202ENST00000358597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.629e-7■□□□□ 10.7
CELF1-202ENST00000358597 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
CELF1-202ENST00000358597 ZNF521Q96K83 1311 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 TNS2Q63HR2 1409 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
CELF1-202ENST00000358597 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
CELF1-202ENST00000358597 NGEFQ8N5V2 710 aa11.16□□□□□ -0.62
CELF1-202ENST00000358597 GJD4Q96KN9 370 aaPredicted RBP11.16□□□□□ -0.62
CELF1-202ENST00000358597 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
CELF1-202ENST00000358597 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
CELF1-202ENST00000358597 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
CELF1-202ENST00000358597 MAP3K5Q99683 1374 aa11.16□□□□□ -0.62
CELF1-202ENST00000358597 RIPK4P57078 832 aa11.15□□□□□ -0.62
CELF1-202ENST00000358597 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.62
CELF1-202ENST00000358597 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.62
CELF1-202ENST00000358597 WWC1Q8IX03 1113 aa11.15□□□□□ -0.62
CELF1-202ENST00000358597 CYP27B1O15528 508 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
CELF1-202ENST00000358597 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
CELF1-202ENST00000358597 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 BRWD3Q6RI45 1802 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 RGS12O14924 1447 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 FKBP8Q14318 412 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 FAM98CQ17RN3 349 aaKnown RBP11.14□□□□□ -0.63
CELF1-202ENST00000358597 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
CELF1-202ENST00000358597 NEFLP07196 543 aa11.13□□□□□ -0.63
CELF1-202ENST00000358597 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
CELF1-202ENST00000358597 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
CELF1-202ENST00000358597 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
CELF1-202ENST00000358597 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
CELF1-202ENST00000358597 ITGB4P16144 1822 aa11.13□□□□□ -0.63
CELF1-202ENST00000358597 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 PHKG2P15735 406 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 MRC1P22897 1456 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
CELF1-202ENST00000358597 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
CELF1-202ENST00000358597 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 DCTN1Q14203 1278 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
CELF1-202ENST00000358597 ANP32EQ9BTT0 268 aa11.12□□□□□ -0.63
CELF1-202ENST00000358597 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
CELF1-202ENST00000358597 MCM10Q7L590 875 aa11.11□□□□□ -0.63
CELF1-202ENST00000358597 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
CELF1-202ENST00000358597 DDB1Q16531 1140 aa11.11□□□□□ -0.63
CELF1-202ENST00000358597 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
CELF1-202ENST00000358597 KDM3BQ7LBC6 1761 aa11.1□□□□□ -0.63
CELF1-202ENST00000358597 A0A0G2JS52 829 aa11.1□□□□□ -0.63
CELF1-202ENST00000358597 EXOC5O00471 708 aa11.1□□□□□ -0.63
CELF1-202ENST00000358597 ILDR2Q71H61 639 aa11.1□□□□□ -0.63
CELF1-202ENST00000358597 WDR63Q8IWG1 891 aa11.1□□□□□ -0.63
CELF1-202ENST00000358597 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
CELF1-202ENST00000358597 SBF2Q86WG5 1849 aa11.1□□□□□ -0.63
CELF1-202ENST00000358597 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
CELF1-202ENST00000358597 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
CELF1-202ENST00000358597 RTF1Q92541 710 aaKnown RBP11.09□□□□□ -0.63
CELF1-202ENST00000358597 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
CELF1-202ENST00000358597 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms