RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 ADRA2BP18089 450 aa6.09□□□□□ -1.43
CKAP5-202ENST00000354558 GPTP24298 496 aa6.09□□□□□ -1.43
CKAP5-202ENST00000354558 OTUD7BQ6GQQ9 843 aa6.09□□□□□ -1.43
CKAP5-202ENST00000354558 BMP2KQ9NSY1 1161 aaPredicted RBP6.09□□□□□ -1.43
CKAP5-202ENST00000354558 NOC2LQ9Y3T9 749 aaKnown RBP6.09□□□□□ -1.43
CKAP5-202ENST00000354558 ATP6V1DQ9Y5K8 247 aa6.09□□□□□ -1.43
CKAP5-202ENST00000354558 HMGN5P82970 282 aaKnown RBP6.08□□□□□ -1.44
CKAP5-202ENST00000354558 CHRNA2Q15822 529 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 CCDC181Q5TID7 509 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 ZKSCAN2Q63HK3 967 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 SMARCC1Q92922 1105 aaPredicted RBP6.08□□□□□ -1.44
CKAP5-202ENST00000354558 LRRC59Q96AG4 307 aaKnown RBP6.08□□□□□ -1.44
CKAP5-202ENST00000354558 SKIDA1Q1XH10 827 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 HDGFL1Q5TGJ6 251 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 HINFPQ9BQA5 517 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 RBM27Q9P2N5 1060 aaKnown RBP6.08□□□□□ -1.44
CKAP5-202ENST00000354558 NUCB2P80303 420 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 SEPT7Q16181 437 aaKnown RBP6.08□□□□□ -1.44
CKAP5-202ENST00000354558 ARID3AQ99856 593 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 NBPF3Q9H094 633 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 STK24Q9Y6E0 443 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 CD109Q6YHK3 1445 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 PRC1O43663 620 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 BICD1Q96G01 975 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 RBM17Q96I25 401 aaKnown RBP6.08□□□□□ -1.44
CKAP5-202ENST00000354558 PICALMQ13492 652 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 USHBP1Q8N6Y0 703 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 PHF8Q9UPP1 1060 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 CCDC88BA6NC98 1476 aa6.08□□□□□ -1.44
CKAP5-202ENST00000354558 MINDY4BA8MYZ0 360 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 CDC5LQ99459 802 aaKnown RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 VPS37CA5D8V6 355 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 H0YIN7 160 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 UBA5Q9GZZ9 404 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 RCAN3Q9UKA8 241 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 FYCO1Q9BQS8 1478 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 CCDC152Q4G0S7 254 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 MSL1Q68DK7 614 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 CLASRPQ8N2M8 674 aaKnown RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 CAGE1Q8TC20 777 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 IPO9Q96P70 1041 aaKnown RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 EYA3Q99504 573 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 CEP126Q9P2H0 1117 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 NOL7Q9UMY1 257 aaKnown RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 EPB41L2O43491 1005 aaKnown RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 PSMA5P28066 241 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 SULT6B1Q6IMI4 303 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 RUFY1Q96T51 708 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 SPC25Q9HBM1 224 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 RAD54L2Q9Y4B4 1467 aa6.07□□□□□ -1.44
CKAP5-202ENST00000354558 RRBP1Q9P2E9 1410 aaKnown RBP6.07□□□□□ -1.44
CKAP5-202ENST00000354558 SURF6O75683 361 aaKnown RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 KIF20AO95235 890 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 GSTO1P78417 241 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 DZIP1LQ8IYY4 767 aaKnown RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 DCPSQ96C86 337 aaKnown RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 MROH2BQ7Z745 1585 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 ANKRD18BA2A2Z9 1011 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 CDR1P51861 262 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 PDE3AQ14432 1141 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 NYXQ9GZU5 481 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 GZF1Q9H116 711 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 FAM135AQ9P2D6 1515 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 GRIN2BQ13224 1484 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 TTLL5Q6EMB2 1281 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 IFT140Q96RY7 1462 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 BRPF1P55201 1214 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 FAM98CQ17RN3 349 aaKnown RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 CABP1Q9NZU7 370 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 EPRSP07814 1512 aaKnown RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-202ENST00000354558 KIF15Q9NS87 1388 aa6.06□□□□□ -1.44
CKAP5-202ENST00000354558 H7C1D1 291 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 M0QZ92 97 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 BAG3O95817 575 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 SETQ01105 290 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 SPTY2D1Q68D10 685 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 ZNF804AQ7Z570 1209 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 NIM1KQ8IY84 436 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 LARGE2Q8N3Y3 721 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 MYD88Q99836 296 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 QTRT2Q9H974 415 aaKnown RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 HIP1O00291 1037 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 GNPATO15228 680 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 NLRP5P59047 1200 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 ARID5AQ03989 594 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 TMEM106CQ9BVX2 250 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 SMC3Q9UQE7 1217 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 STIM1Q13586 685 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 ATP2B3Q16720 1220 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 SNAPC4Q5SXM2 1469 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 PPP1R12BO60237 982 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 LDHCP07864 332 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 RRS1Q15050 365 aaKnown RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 CCDC73Q6ZRK6 1079 aa6.05□□□□□ -1.44
CKAP5-202ENST00000354558 CCNL1Q9UK58 526 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 IFIT5Q13325 482 aaKnown RBP6.05□□□□□ -1.44
CKAP5-202ENST00000354558 FAM47CQ5HY64 1035 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms