RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 NBPF4Q96M43 638 aa32.35■■■□□ 2.77
TRADD-201ENST00000345057 VAMP4O75379 141 aa32.35■■■□□ 2.77
TRADD-201ENST00000345057 FTSJ3Q8IY81 847 aaKnown RBP32.35■■■□□ 2.77
TRADD-201ENST00000345057 PANK1Q8TE04 598 aa32.35■■■□□ 2.77
TRADD-201ENST00000345057 TWISTNBQ3B726 338 aaPredicted RBP32.34■■■□□ 2.77
TRADD-201ENST00000345057 ANKRD24Q8TF21 1146 aa32.34■■■□□ 2.77
TRADD-201ENST00000345057 MAP3K5Q99683 1374 aa32.34■■■□□ 2.77
TRADD-201ENST00000345057 DZIP1LQ8IYY4 767 aaKnown RBP32.33■■■□□ 2.77
TRADD-201ENST00000345057 KIAA0232Q92628 1395 aa32.33■■■□□ 2.77
TRADD-201ENST00000345057 COG6Q9Y2V7 657 aa32.33■■■□□ 2.77
TRADD-201ENST00000345057 ATF7IPQ6VMQ6 1270 aa32.32■■■□□ 2.76
TRADD-201ENST00000345057 CERKQ8TCT0 537 aa32.32■■■□□ 2.76
TRADD-201ENST00000345057 CAMTA1Q9Y6Y1 1673 aa32.32■■■□□ 2.76
TRADD-201ENST00000345057 CENPQQ7L2Z9 268 aaPredicted RBP32.31■■■□□ 2.76
TRADD-201ENST00000345057 LRRC37A3O60309 1634 aa32.3■■■□□ 2.76
TRADD-201ENST00000345057 USHBP1Q8N6Y0 703 aa32.3■■■□□ 2.76
TRADD-201ENST00000345057 CLUAP1Q96AJ1 413 aa32.3■■■□□ 2.76
TRADD-201ENST00000345057 SOS2Q07890 1332 aaPredicted RBP32.3■■■□□ 2.76
TRADD-201ENST00000345057 PLEKHG5O94827 1062 aa32.29■■■□□ 2.76
TRADD-201ENST00000345057 ZC3H6P61129 1189 aaKnown RBP32.29■■■□□ 2.76
TRADD-201ENST00000345057 AMOTQ4VCS5 1084 aa32.29■■■□□ 2.76
TRADD-201ENST00000345057 BABAM1Q9NWV8 329 aa32.29■■■□□ 2.76
TRADD-201ENST00000345057 CRYBG1Q9Y4K1 1723 aa32.28■■■□□ 2.76
TRADD-201ENST00000345057 NOB1Q9ULX3 412 aaKnown RBP32.28■■■□□ 2.76
TRADD-201ENST00000345057 MVPQ14764 893 aaKnown RBP32.27■■■□□ 2.76
TRADD-201ENST00000345057 ARHGAP45Q92619 1136 aa32.27■■■□□ 2.76
TRADD-201ENST00000345057 ERBB3P21860 1342 aa32.27■■■□□ 2.76
TRADD-201ENST00000345057 CPDO75976 1380 aa32.27■■■□□ 2.76
TRADD-201ENST00000345057 TRIM27P14373 513 aa32.26■■■□□ 2.75
TRADD-201ENST00000345057 PLEKHO1Q53GL0 409 aaPredicted RBP32.26■■■□□ 2.75
TRADD-201ENST00000345057 TSPYL6Q8N831 410 aa32.26■■■□□ 2.75
TRADD-201ENST00000345057 C8orf58Q8NAV2 365 aa32.26■■■□□ 2.75
TRADD-201ENST00000345057 RGPD2P0DJD1 1756 aa32.25■■■□□ 2.75
TRADD-201ENST00000345057 KDM2BQ8NHM5 1336 aa32.25■■■□□ 2.75
TRADD-201ENST00000345057 LRRC59Q96AG4 307 aaKnown RBP32.25■■■□□ 2.75
TRADD-201ENST00000345057 RLBP1P12271 317 aa32.25■■■□□ 2.75
TRADD-201ENST00000345057 AXIN2Q9Y2T1 843 aa32.25■■■□□ 2.75
TRADD-201ENST00000345057 TSPYL4Q9UJ04 414 aa32.24■■■□□ 2.75
TRADD-201ENST00000345057 MRPL50Q8N5N7 158 aaKnown RBP32.23■■■□□ 2.75
TRADD-201ENST00000345057 FAM208AQ9UK61 1670 aaKnown RBP32.23■■■□□ 2.75
TRADD-201ENST00000345057 DDX19BQ9UMR2 479 aa32.23■■■□□ 2.75
TRADD-201ENST00000345057 PLEKHG2Q9H7P9 1386 aa32.22■■■□□ 2.75
TRADD-201ENST00000345057 LMO7Q8WWI1 1683 aa32.21■■■□□ 2.75
TRADD-201ENST00000345057 COL18A1P39060 1754 aa32.21■■■□□ 2.75
TRADD-201ENST00000345057 ELL2O00472 640 aaPredicted RBP32.2■■■□□ 2.75
TRADD-201ENST00000345057 NHSL1Q5SYE7 1610 aa32.2■■■□□ 2.75
TRADD-201ENST00000345057 SOS1Q07889 1333 aaPredicted RBP32.19■■■□□ 2.74
TRADD-201ENST00000345057 AKAP4Q5JQC9 854 aa32.19■■■□□ 2.74
TRADD-201ENST00000345057 TNNQ9UQP3 1299 aa32.19■■■□□ 2.74
TRADD-201ENST00000345057 RGPD5Q99666 1765 aa32.19■■■□□ 2.74
TRADD-201ENST00000345057 CABLES1Q8TDN4 633 aa32.18■■■□□ 2.74
TRADD-201ENST00000345057 CHMP4BQ9H444 224 aaKnown RBP32.18■■■□□ 2.74
TRADD-201ENST00000345057 TAF7Q15545 349 aaPredicted RBP32.17■■■□□ 2.74
TRADD-201ENST00000345057 IL17REQ8NFR9 667 aa32.17■■■□□ 2.74
TRADD-201ENST00000345057 CEMIPQ8WUJ3 1361 aa32.17■■■□□ 2.74
TRADD-201ENST00000345057 TCERG1O14776 1098 aaKnown RBP32.16■■■□□ 2.74
TRADD-201ENST00000345057 API5Q9BZZ5 524 aaKnown RBP32.15■■■□□ 2.74
TRADD-201ENST00000345057 OVOS2A0A0G2JMS6 1433 aa32.15■■■□□ 2.74
TRADD-201ENST00000345057 C1orf141Q5JVX7 400 aa32.14■■■□□ 2.74
TRADD-201ENST00000345057 ZNF530Q6P9A1 599 aaPredicted RBP32.14■■■□□ 2.74
TRADD-201ENST00000345057 ITPRIPQ8IWB1 547 aa32.14■■■□□ 2.74
TRADD-201ENST00000345057 RAPGEF4Q8WZA2 1011 aa32.12■■■□□ 2.73
TRADD-201ENST00000345057 CSB-PGBD3P0DP91 1061 aa32.12■■■□□ 2.73
TRADD-201ENST00000345057 NLRP2Q9NX02 1062 aa32.12■■■□□ 2.73
TRADD-201ENST00000345057 TMEM57Q8N5G2 664 aa32.1■■■□□ 2.73
TRADD-201ENST00000345057 MIS18AQ9NYP9 233 aa32.09■■■□□ 2.73
TRADD-201ENST00000345057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.08■■■□□ 2.73
TRADD-201ENST00000345057 CHMP4AQ9BY43 222 aa32.08■■■□□ 2.73
TRADD-201ENST00000345057 PTPRCP08575 1304 aa32.07■■■□□ 2.72
TRADD-201ENST00000345057 TATP17735 454 aaPredicted RBP32.07■■■□□ 2.72
TRADD-201ENST00000345057 PRDM11Q9NQV5 511 aa32.07■■■□□ 2.72
TRADD-201ENST00000345057 ABCC4O15439 1325 aa32.06■■■□□ 2.72
TRADD-201ENST00000345057 CHRNA2Q15822 529 aa32.06■■■□□ 2.72
TRADD-201ENST00000345057 RWDD1Q9H446 243 aaPredicted RBP32.06■■■□□ 2.72
TRADD-201ENST00000345057 TEFQ10587 303 aa32.06■■■□□ 2.72
TRADD-201ENST00000345057 KRT24Q2M2I5 525 aa32.06■■■□□ 2.72
TRADD-201ENST00000345057 ABCA3Q99758 1704 aa32.05■■■□□ 2.72
TRADD-201ENST00000345057 SPG7Q9UQ90 795 aa32.04■■■□□ 2.72
TRADD-201ENST00000345057 RBM19Q9Y4C8 960 aaKnown RBP32.04■■■□□ 2.72
TRADD-201ENST00000345057 PCDHB15Q9Y5E8 787 aa32.02■■■□□ 2.72
TRADD-201ENST00000345057 RNMTO43148 476 aaKnown RBP32.01■■■□□ 2.72
TRADD-201ENST00000345057 IGHDP01880 384 aa32.01■■■□□ 2.72
TRADD-201ENST00000345057 STK31Q9BXU1 1019 aa32.01■■■□□ 2.72
TRADD-201ENST00000345057 UBAP1LF5GYI3 381 aa32.01■■■□□ 2.71
TRADD-201ENST00000345057 CCDC30Q5VVM6 783 aa32.01■■■□□ 2.71
TRADD-201ENST00000345057 ZBTB40Q9NUA8 1239 aa32.01■■■□□ 2.71
TRADD-201ENST00000345057 LGR6Q9HBX8 967 aa32■■■□□ 2.71
TRADD-201ENST00000345057 HOXB7P09629 217 aa31.99■■■□□ 2.71
TRADD-201ENST00000345057 WDR17Q8IZU2 1322 aa31.98■■■□□ 2.71
TRADD-201ENST00000345057 KDM3BQ7LBC6 1761 aa31.98■■■□□ 2.71
TRADD-201ENST00000345057 ADAMTS7Q9UKP4 1686 aa31.98■■■□□ 2.71
TRADD-201ENST00000345057 MPRIPQ6WCQ1 1025 aa31.98■■■□□ 2.71
TRADD-201ENST00000345057 AHDC1Q5TGY3 1603 aaPredicted RBP31.98■■■□□ 2.71
TRADD-201ENST00000345057 SLC4A2P04920 1241 aa31.97■■■□□ 2.71
TRADD-201ENST00000345057 ROBO1Q9Y6N7 1651 aa31.97■■■□□ 2.71
TRADD-201ENST00000345057 HDAC1Q13547 482 aaPredicted RBP31.96■■■□□ 2.71
TRADD-201ENST00000345057 BTBD11A6QL63 1104 aa31.95■■■□□ 2.71
TRADD-201ENST00000345057 TOM1O60784 492 aa31.95■■■□□ 2.71
TRADD-201ENST00000345057 MEGF6O75095 1541 aa31.95■■■□□ 2.71
TRADD-201ENST00000345057 COL5A2P05997 1499 aaPredicted RBP31.95■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms