RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 WDR66Q8TBY9 1149 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 CEP83Q9Y592 693 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 SYCE3A1L190 88 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 CCDC69A6NI79 296 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 ATF3P18847 181 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 SFPQP23246 707 aaKnown RBP eCLIP14.98□□□□□ -0.01
USP47-202ENST00000339865 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 MXRA7P84157 204 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 CAMK4Q16566 473 aa14.98□□□□□ -0.01
USP47-202ENST00000339865 CTNNA2P26232 953 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 VTI1AQ96AJ9 217 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 TRMT1Q9NXH9 659 aaKnown RBP14.97□□□□□ -0.01
USP47-202ENST00000339865 PAFAH1B1P43034 410 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 ZSCAN30Q86W11 494 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 FAM114A1Q8IWE2 563 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 PPP1R14CQ8TAE6 165 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.97□□□□□ -0.01
USP47-202ENST00000339865 CPSF2Q9P2I0 782 aaKnown RBP14.97□□□□□ -0.01
USP47-202ENST00000339865 NUP133Q8WUM0 1156 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 C16orf45Q96MC5 204 aaPredicted RBP14.97□□□□□ -0.01
USP47-202ENST00000339865 CACNA2D4Q7Z3S7 1137 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 PAIP2Q9BPZ3 127 aaKnown RBP14.97□□□□□ -0.01
USP47-202ENST00000339865 WASHC2AQ641Q2 1341 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 ZSCAN12O43309 604 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
USP47-202ENST00000339865 CEP57Q86XR8 500 aa14.97□□□□□ -0.01
USP47-202ENST00000339865 KIF2AO00139 706 aaPredicted RBP14.96□□□□□ -0.01
USP47-202ENST00000339865 KCNA4P22459 653 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 ANKRD1Q15327 319 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 CYP46A1Q9Y6A2 500 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 KLHL10Q6JEL2 608 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 HIP1O00291 1037 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 TTC36A6NLP5 189 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 TMCO4Q5TGY1 634 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 MAATS1Q7Z4T9 603 aa14.96□□□□□ -0.01
USP47-202ENST00000339865 SCLT1Q96NL6 688 aa14.96□□□□□ -0.02
USP47-202ENST00000339865 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.96□□□□□ -0.02
USP47-202ENST00000339865 V9GYY5 206 aaPredicted RBP14.96□□□□□ -0.02
USP47-202ENST00000339865 PSMC4P43686 418 aa14.95□□□□□ -0.02
USP47-202ENST00000339865 FAM184BQ9ULE4 1060 aa14.95□□□□□ -0.02
USP47-202ENST00000339865 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
USP47-202ENST00000339865 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
USP47-202ENST00000339865 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
USP47-202ENST00000339865 CCDC96Q2M329 555 aa14.95□□□□□ -0.02
USP47-202ENST00000339865 PIBF1Q8WXW3 757 aa14.95□□□□□ -0.02
USP47-202ENST00000339865 FEZ2Q9UHY8 353 aaPredicted RBP14.95□□□□□ -0.02
USP47-202ENST00000339865 ARID4AP29374 1257 aaPredicted RBP14.94□□□□□ -0.02
USP47-202ENST00000339865 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
USP47-202ENST00000339865 PPP1R12BO60237 982 aaPredicted RBP14.94□□□□□ -0.02
USP47-202ENST00000339865 NOL3O60936 208 aaKnown RBP14.94□□□□□ -0.02
USP47-202ENST00000339865 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
USP47-202ENST00000339865 MAP3K11Q16584 847 aa14.94□□□□□ -0.02
USP47-202ENST00000339865 RAB3IL1Q8TBN0 382 aa14.94□□□□□ -0.02
USP47-202ENST00000339865 PRPF4BQ13523 1007 aaKnown RBP14.94□□□□□ -0.02
USP47-202ENST00000339865 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
USP47-202ENST00000339865 TDO2P48775 406 aa14.94□□□□□ -0.02
USP47-202ENST00000339865 STRN4Q9NRL3 753 aa14.93□□□□□ -0.02
USP47-202ENST00000339865 NOL7Q9UMY1 257 aaKnown RBP14.93□□□□□ -0.02
USP47-202ENST00000339865 K7ELQ4 463 aaPredicted RBP14.93□□□□□ -0.02
USP47-202ENST00000339865 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
USP47-202ENST00000339865 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
USP47-202ENST00000339865 ZSCAN29Q8IWY8 852 aaPredicted RBP14.93□□□□□ -0.02
USP47-202ENST00000339865 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
USP47-202ENST00000339865 VPS36Q86VN1 386 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 ST20-MTHFSA0A0A6YYL1 179 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 ZNF76P36508 570 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 MIPOL1Q8TD10 442 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 NAA25Q14CX7 972 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 NAA15Q9BXJ9 866 aaKnown RBP14.92□□□□□ -0.02
USP47-202ENST00000339865 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
USP47-202ENST00000339865 IKBKGQ9Y6K9 419 aa14.92□□□□□ -0.02
USP47-202ENST00000339865 HMOX1P09601 288 aa14.91□□□□□ -0.02
USP47-202ENST00000339865 TOP1P11387 765 aaKnown RBP14.91□□□□□ -0.02
USP47-202ENST00000339865 TTC39AQ5SRH9 613 aa14.91□□□□□ -0.02
USP47-202ENST00000339865 CEP112Q8N8E3 955 aa14.91□□□□□ -0.02
USP47-202ENST00000339865 L3MBTL2Q969R5 705 aa14.91□□□□□ -0.02
USP47-202ENST00000339865 NOP2P46087 812 aaKnown RBP14.91□□□□□ -0.02
USP47-202ENST00000339865 CWC25Q9NXE8 425 aaPredicted RBP14.91□□□□□ -0.02
USP47-202ENST00000339865 EP400NLQ6ZTU2 488 aa14.91□□□□□ -0.02
USP47-202ENST00000339865 MICALL1Q8N3F8 863 aa14.91□□□□□ -0.02
USP47-202ENST00000339865 TSNARE1Q96NA8 513 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 TPD52P55327 224 aaPredicted RBP14.9□□□□□ -0.02
USP47-202ENST00000339865 FKBP15Q5T1M5 1219 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 DZIP1Q86YF9 867 aaKnown RBP14.9□□□□□ -0.02
USP47-202ENST00000339865 ZNF428Q96B54 188 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
USP47-202ENST00000339865 ANKS4BQ8N8V4 417 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 USO1O60763 962 aaKnown RBP14.9□□□□□ -0.02
USP47-202ENST00000339865 RSPH14Q9UHP6 348 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 HSF2BPO75031 334 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
USP47-202ENST00000339865 ZFYP08048 801 aaPredicted RBP14.89□□□□□ -0.03
USP47-202ENST00000339865 RPUSD2Q8IZ73 545 aaKnown RBP14.89□□□□□ -0.03
USP47-202ENST00000339865 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
USP47-202ENST00000339865 FLIIQ13045 1269 aa14.89□□□□□ -0.03
USP47-202ENST00000339865 GBP7Q8N8V2 638 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms