RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
PRIM1-201ENST00000338193 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
PRIM1-201ENST00000338193 C19orf67A6NJJ6 358 aa16.95■□□□□ 0.3
PRIM1-201ENST00000338193 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
PRIM1-201ENST00000338193 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
PRIM1-201ENST00000338193 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
PRIM1-201ENST00000338193 EYA1Q99502 592 aa16.94■□□□□ 0.3
PRIM1-201ENST00000338193 AEBP1Q8IUX7 1158 aa16.93■□□□□ 0.3
PRIM1-201ENST00000338193 MIER1Q8N108 512 aa16.93■□□□□ 0.3
PRIM1-201ENST00000338193 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
PRIM1-201ENST00000338193 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
PRIM1-201ENST00000338193 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
PRIM1-201ENST00000338193 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
PRIM1-201ENST00000338193 GJD4Q96KN9 370 aaPredicted RBP16.92■□□□□ 0.3
PRIM1-201ENST00000338193 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
PRIM1-201ENST00000338193 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
PRIM1-201ENST00000338193 MEGF6O75095 1541 aa16.92■□□□□ 0.3
PRIM1-201ENST00000338193 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
PRIM1-201ENST00000338193 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
PRIM1-201ENST00000338193 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
PRIM1-201ENST00000338193 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
PRIM1-201ENST00000338193 IGSF1Q8N6C5 1336 aa16.9■□□□□ 0.3
PRIM1-201ENST00000338193 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
PRIM1-201ENST00000338193 FAM98CQ17RN3 349 aaKnown RBP16.89■□□□□ 0.3
PRIM1-201ENST00000338193 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
PRIM1-201ENST00000338193 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
PRIM1-201ENST00000338193 HMOX1P09601 288 aa16.89■□□□□ 0.29
PRIM1-201ENST00000338193 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
PRIM1-201ENST00000338193 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
PRIM1-201ENST00000338193 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
PRIM1-201ENST00000338193 RGS12O14924 1447 aa16.88■□□□□ 0.29
PRIM1-201ENST00000338193 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
PRIM1-201ENST00000338193 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
PRIM1-201ENST00000338193 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
PRIM1-201ENST00000338193 KDRP35968 1356 aa16.84■□□□□ 0.29
PRIM1-201ENST00000338193 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
PRIM1-201ENST00000338193 GABBR2O75899 941 aa16.84■□□□□ 0.29
PRIM1-201ENST00000338193 RXRBP28702 533 aa16.84■□□□□ 0.29
PRIM1-201ENST00000338193 BARGINQ6ZT62 677 aa16.84■□□□□ 0.29
PRIM1-201ENST00000338193 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
PRIM1-201ENST00000338193 ONECUT3O60422 494 aaPredicted RBP16.83■□□□□ 0.28
PRIM1-201ENST00000338193 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
PRIM1-201ENST00000338193 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
PRIM1-201ENST00000338193 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
PRIM1-201ENST00000338193 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRIM1-201ENST00000338193 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
PRIM1-201ENST00000338193 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
PRIM1-201ENST00000338193 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
PRIM1-201ENST00000338193 IL2RBP14784 551 aa16.81■□□□□ 0.28
PRIM1-201ENST00000338193 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
PRIM1-201ENST00000338193 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
PRIM1-201ENST00000338193 ADAMTS8Q9UP79 889 aa16.8■□□□□ 0.28
PRIM1-201ENST00000338193 EP400Q96L91 3159 aa16.79■□□□□ 0.28
PRIM1-201ENST00000338193 A0A0G2JS52 829 aa16.79■□□□□ 0.28
PRIM1-201ENST00000338193 MYT1Q01538 1121 aa16.79■□□□□ 0.28
PRIM1-201ENST00000338193 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
PRIM1-201ENST00000338193 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
PRIM1-201ENST00000338193 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
PRIM1-201ENST00000338193 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
PRIM1-201ENST00000338193 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
PRIM1-201ENST00000338193 PRKAR2BP31323 418 aa16.78■□□□□ 0.28
PRIM1-201ENST00000338193 LHX8Q68G74 356 aa16.78■□□□□ 0.28
PRIM1-201ENST00000338193 CCDC146Q8IYE0 955 aa16.78■□□□□ 0.28
PRIM1-201ENST00000338193 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
PRIM1-201ENST00000338193 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
PRIM1-201ENST00000338193 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
PRIM1-201ENST00000338193 PLEKHF1Q96S99 279 aa16.77■□□□□ 0.28
PRIM1-201ENST00000338193 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.27
PRIM1-201ENST00000338193 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
PRIM1-201ENST00000338193 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
PRIM1-201ENST00000338193 CYP27B1O15528 508 aa16.75■□□□□ 0.27
PRIM1-201ENST00000338193 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRIM1-201ENST00000338193 DDB1Q16531 1140 aa16.75■□□□□ 0.27
PRIM1-201ENST00000338193 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
PRIM1-201ENST00000338193 ZCRB1Q8TBF4 217 aaKnown RBP16.75■□□□□ 0.27
PRIM1-201ENST00000338193 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
PRIM1-201ENST00000338193 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
PRIM1-201ENST00000338193 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
PRIM1-201ENST00000338193 EXOC5O00471 708 aa16.73■□□□□ 0.27
PRIM1-201ENST00000338193 FCHSD2O94868 740 aa16.73■□□□□ 0.27
PRIM1-201ENST00000338193 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
PRIM1-201ENST00000338193 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
PRIM1-201ENST00000338193 CDCA7Q9BWT1 371 aaPredicted RBP16.72■□□□□ 0.27
PRIM1-201ENST00000338193 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
PRIM1-201ENST00000338193 PTF1AQ7RTS3 328 aa16.71■□□□□ 0.27
PRIM1-201ENST00000338193 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
PRIM1-201ENST00000338193 SBF2Q86WG5 1849 aa16.71■□□□□ 0.27
PRIM1-201ENST00000338193 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
PRIM1-201ENST00000338193 PHKG2P15735 406 aa16.7■□□□□ 0.26
PRIM1-201ENST00000338193 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
PRIM1-201ENST00000338193 PDE3BQ13370 1112 aa16.69■□□□□ 0.26
PRIM1-201ENST00000338193 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
PRIM1-201ENST00000338193 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
PRIM1-201ENST00000338193 CHADLQ6NUI6 762 aa16.68■□□□□ 0.26
PRIM1-201ENST00000338193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.268e-7■□□□□ 8.8
PRIM1-201ENST00000338193 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
PRIM1-201ENST00000338193 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
PRIM1-201ENST00000338193 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
PRIM1-201ENST00000338193 SCN11AQ9UI33 1791 aa16.67■□□□□ 0.26
PRIM1-201ENST00000338193 ITGB4P16144 1822 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms