RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
ATF3-201ENST00000336937 HSP90AB1P08238 724 aaKnown RBP9.37□□□□□ -0.91
ATF3-201ENST00000336937 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
ATF3-201ENST00000336937 ZCRB1Q8TBF4 217 aaKnown RBP9.37□□□□□ -0.91
ATF3-201ENST00000336937 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
ATF3-201ENST00000336937 CFAP53Q96M91 514 aa9.37□□□□□ -0.91
ATF3-201ENST00000336937 LRP5O75197 1615 aa9.36□□□□□ -0.91
ATF3-201ENST00000336937 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
ATF3-201ENST00000336937 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
ATF3-201ENST00000336937 LY75O60449 1722 aa9.36□□□□□ -0.91
ATF3-201ENST00000336937 QSER1Q2KHR3 1735 aa9.36□□□□□ -0.91
ATF3-201ENST00000336937 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
ATF3-201ENST00000336937 TRIM37O94972 964 aa9.35□□□□□ -0.91
ATF3-201ENST00000336937 APBA3O96018 575 aa9.35□□□□□ -0.91
ATF3-201ENST00000336937 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
ATF3-201ENST00000336937 MARCH10Q8NA82 808 aaPredicted RBP9.35□□□□□ -0.91
ATF3-201ENST00000336937 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
ATF3-201ENST00000336937 TNNT2P45379 298 aaPredicted RBP9.34□□□□□ -0.91
ATF3-201ENST00000336937 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
ATF3-201ENST00000336937 EYA1Q99502 592 aa9.34□□□□□ -0.91
ATF3-201ENST00000336937 PAPPAQ13219 1627 aa9.34□□□□□ -0.91
ATF3-201ENST00000336937 ITGB4P16144 1822 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 DIAPH1O60610 1272 aaKnown RBP9.33□□□□□ -0.92
ATF3-201ENST00000336937 MTHFSP49914 203 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 RALBP1Q15311 655 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
ATF3-201ENST00000336937 NBPF14Q5TI25 921 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 IFNL2Q8IZJ0 200 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 NUDCQ9Y266 331 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 CICQ96RK0 1608 aaPredicted RBP9.33□□□□□ -0.92
ATF3-201ENST00000336937 TOGARAM1Q9Y4F4 1720 aa9.33□□□□□ -0.92
ATF3-201ENST00000336937 FBLN1P23142 703 aa9.32□□□□□ -0.92
ATF3-201ENST00000336937 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
ATF3-201ENST00000336937 PLEKHO1Q53GL0 409 aaPredicted RBP9.32□□□□□ -0.92
ATF3-201ENST00000336937 CAMKK2Q96RR4 588 aa9.32□□□□□ -0.92
ATF3-201ENST00000336937 MRC1P22897 1456 aa9.32□□□□□ -0.92
ATF3-201ENST00000336937 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
ATF3-201ENST00000336937 SCN11AQ9UI33 1791 aa9.32□□□□□ -0.92
ATF3-201ENST00000336937 IL13P35225 146 aa9.31□□□□□ -0.92
ATF3-201ENST00000336937 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
ATF3-201ENST00000336937 FAM182BQ5T319 152 aa9.31□□□□□ -0.92
ATF3-201ENST00000336937 DEFB132Q7Z7B7 95 aa9.31□□□□□ -0.92
ATF3-201ENST00000336937 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
ATF3-201ENST00000336937 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
ATF3-201ENST00000336937 PNNQ9H307 717 aaKnown RBP9.31□□□□□ -0.92
ATF3-201ENST00000336937 C5P01031 1676 aa9.31□□□□□ -0.92
ATF3-201ENST00000336937 KAT6BQ8WYB5 2073 aa9.31□□□□□ -0.92
ATF3-201ENST00000336937 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
ATF3-201ENST00000336937 NEFMP07197 916 aa9.3□□□□□ -0.92
ATF3-201ENST00000336937 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
ATF3-201ENST00000336937 USHBP1Q8N6Y0 703 aa9.3□□□□□ -0.92
ATF3-201ENST00000336937 DCAF5Q96JK2 942 aa9.3□□□□□ -0.92
ATF3-201ENST00000336937 ERVV-2B6SEH9 535 aa9.29□□□□□ -0.92
ATF3-201ENST00000336937 PHKG2P15735 406 aa9.29□□□□□ -0.92
ATF3-201ENST00000336937 EZH2Q15910 746 aaKnown RBP9.29□□□□□ -0.92
ATF3-201ENST00000336937 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
ATF3-201ENST00000336937 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
ATF3-201ENST00000336937 TAF1LQ8IZX4 1826 aa9.28□□□□□ -0.92
ATF3-201ENST00000336937 CASZ1Q86V15 1759 aa9.28□□□□□ -0.92
ATF3-201ENST00000336937 CYP27B1O15528 508 aa9.28□□□□□ -0.92
ATF3-201ENST00000336937 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
ATF3-201ENST00000336937 AKAP4Q5JQC9 854 aa9.28□□□□□ -0.92
ATF3-201ENST00000336937 MYBBP1AQ9BQG0 1328 aaKnown RBP9.28□□□□□ -0.92
ATF3-201ENST00000336937 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
ATF3-201ENST00000336937 SYTL4Q96C24 671 aaPredicted RBP9.27□□□□□ -0.93
ATF3-201ENST00000336937 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
ATF3-201ENST00000336937 PALLDQ8WX93 1383 aa9.26□□□□□ -0.93
ATF3-201ENST00000336937 FCHSD2O94868 740 aa9.26□□□□□ -0.93
ATF3-201ENST00000336937 ZNF530Q6P9A1 599 aaPredicted RBP9.26□□□□□ -0.93
ATF3-201ENST00000336937 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
ATF3-201ENST00000336937 STK32BQ9NY57 414 aa9.26□□□□□ -0.93
ATF3-201ENST00000336937 MAP3K5Q99683 1374 aa9.25□□□□□ -0.93
ATF3-201ENST00000336937 COL5A3P25940 1745 aaPredicted RBP9.25□□□□□ -0.93
ATF3-201ENST00000336937 KDM6AO15550 1401 aaPredicted RBP9.25□□□□□ -0.93
ATF3-201ENST00000336937 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
ATF3-201ENST00000336937 FLAD1Q8NFF5 587 aa9.25□□□□□ -0.93
ATF3-201ENST00000336937 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
ATF3-201ENST00000336937 SIPA1L3O60292 1781 aaPredicted RBP9.24□□□□□ -0.93
ATF3-201ENST00000336937 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
ATF3-201ENST00000336937 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
ATF3-201ENST00000336937 KCNQ2O43526 872 aa9.24□□□□□ -0.93
ATF3-201ENST00000336937 COL24A1Q17RW2 1714 aa9.24□□□□□ -0.93
ATF3-201ENST00000336937 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
ATF3-201ENST00000336937 HTATSF1O43719 755 aaKnown RBP9.23□□□□□ -0.93
ATF3-201ENST00000336937 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
ATF3-201ENST00000336937 SLC15A2Q16348 729 aa9.23□□□□□ -0.93
ATF3-201ENST00000336937 SLC16A10Q8TF71 515 aa9.23□□□□□ -0.93
ATF3-201ENST00000336937 CCNL1Q9UK58 526 aaPredicted RBP9.23□□□□□ -0.93
ATF3-201ENST00000336937 TUBGCP6Q96RT7 1819 aa9.23□□□□□ -0.93
ATF3-201ENST00000336937 GNAT3A8MTJ3 354 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
ATF3-201ENST00000336937 CABP4P57796 275 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATF3-201ENST00000336937 MPRIPQ6WCQ1 1025 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 AEBP1Q8IUX7 1158 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 MAPK8IP3Q9UPT6 1336 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 CEMIPQ8WUJ3 1361 aa9.22□□□□□ -0.93
ATF3-201ENST00000336937 UBR3Q6ZT12 1888 aa9.21□□□□□ -0.93
ATF3-201ENST00000336937 HMOX1P09601 288 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms