RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 NUTM2GQ5VZR2 741 aa19.67■□□□□ 0.74
TSC22D3-201ENST00000315660 GCC1Q96CN9 775 aa19.67■□□□□ 0.74
TSC22D3-201ENST00000315660 TBC1D32Q96NH3 1257 aa19.67■□□□□ 0.74
TSC22D3-201ENST00000315660 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
TSC22D3-201ENST00000315660 MARF1Q9Y4F3 1742 aaKnown RBP19.67■□□□□ 0.74
TSC22D3-201ENST00000315660 CHD2O14647 1828 aaKnown RBP19.66■□□□□ 0.74
TSC22D3-201ENST00000315660 USP54Q70EL1 1684 aa19.66■□□□□ 0.74
TSC22D3-201ENST00000315660 CHD1LQ86WJ1 897 aa19.66■□□□□ 0.74
TSC22D3-201ENST00000315660 ZNF142P52746 1687 aaPredicted RBP19.66■□□□□ 0.74
TSC22D3-201ENST00000315660 HOXC9P31274 260 aa19.66■□□□□ 0.74
TSC22D3-201ENST00000315660 ABTB2Q8N961 1025 aa19.66■□□□□ 0.74
TSC22D3-201ENST00000315660 LNPKQ9C0E8 428 aa19.65■□□□□ 0.74
TSC22D3-201ENST00000315660 SIRT2Q8IXJ6 389 aa19.64■□□□□ 0.74
TSC22D3-201ENST00000315660 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.74
TSC22D3-201ENST00000315660 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.74
TSC22D3-201ENST00000315660 RGS12O14924 1447 aa19.63■□□□□ 0.73
TSC22D3-201ENST00000315660 INTS3Q68E01 1043 aaKnown RBP19.63■□□□□ 0.73
TSC22D3-201ENST00000315660 MIS18AQ9NYP9 233 aa19.62■□□□□ 0.73
TSC22D3-201ENST00000315660 RTN4Q9NQC3 1192 aaKnown RBP19.61■□□□□ 0.73
TSC22D3-201ENST00000315660 ANKRD45Q5TZF3 282 aa19.61■□□□□ 0.73
TSC22D3-201ENST00000315660 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
TSC22D3-201ENST00000315660 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
TSC22D3-201ENST00000315660 PTPRCP08575 1304 aa19.61■□□□□ 0.73
TSC22D3-201ENST00000315660 RBM33Q96EV2 1170 aaKnown RBP19.6■□□□□ 0.73
TSC22D3-201ENST00000315660 ADAMTSL3P82987 1691 aa19.6■□□□□ 0.73
TSC22D3-201ENST00000315660 HTATSF1O43719 755 aaKnown RBP19.6■□□□□ 0.73
TSC22D3-201ENST00000315660 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
TSC22D3-201ENST00000315660 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
TSC22D3-201ENST00000315660 RTL1A6NKG5 1358 aa19.58■□□□□ 0.73
TSC22D3-201ENST00000315660 MFAP1P55081 439 aaKnown RBP19.57■□□□□ 0.72
TSC22D3-201ENST00000315660 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
TSC22D3-201ENST00000315660 C22orf23Q9BZE7 217 aa19.57■□□□□ 0.72
TSC22D3-201ENST00000315660 GNAT3A8MTJ3 354 aa19.56■□□□□ 0.72
TSC22D3-201ENST00000315660 BMP2KLQ5H9B9 411 aa19.56■□□□□ 0.72
TSC22D3-201ENST00000315660 LTV1Q96GA3 475 aaPredicted RBP19.56■□□□□ 0.72
TSC22D3-201ENST00000315660 LRRC37A3O60309 1634 aa19.56■□□□□ 0.72
TSC22D3-201ENST00000315660 BRPF3Q9ULD4 1205 aa19.55■□□□□ 0.72
TSC22D3-201ENST00000315660 SETD1BQ9UPS6 1966 aaKnown RBP19.55■□□□□ 0.72
TSC22D3-201ENST00000315660 ESCO1Q5FWF5 840 aa19.55■□□□□ 0.72
TSC22D3-201ENST00000315660 MSH6P52701 1360 aa19.54■□□□□ 0.72
TSC22D3-201ENST00000315660 FRAT2O75474 233 aaPredicted RBP19.54■□□□□ 0.72
TSC22D3-201ENST00000315660 NPHP4O75161 1426 aaPredicted RBP19.54■□□□□ 0.72
TSC22D3-201ENST00000315660 ATP10DQ9P241 1426 aa19.54■□□□□ 0.72
TSC22D3-201ENST00000315660 ANKRD44Q8N8A2 993 aa19.53■□□□□ 0.72
TSC22D3-201ENST00000315660 MAP3K5Q99683 1374 aa19.53■□□□□ 0.72
TSC22D3-201ENST00000315660 NFAT5O94916 1531 aa19.53■□□□□ 0.72
TSC22D3-201ENST00000315660 PSME1Q06323 249 aa19.53■□□□□ 0.72
TSC22D3-201ENST00000315660 IP6K1Q92551 441 aa19.53■□□□□ 0.72
TSC22D3-201ENST00000315660 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
TSC22D3-201ENST00000315660 G2E3Q7L622 706 aa19.52■□□□□ 0.72
TSC22D3-201ENST00000315660 RPAP2Q8IXW5 612 aaPredicted RBP19.52■□□□□ 0.72
TSC22D3-201ENST00000315660 TBC1D2Q9BYX2 928 aa19.52■□□□□ 0.72
TSC22D3-201ENST00000315660 LTN1O94822 1766 aa19.52■□□□□ 0.72
TSC22D3-201ENST00000315660 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.71
TSC22D3-201ENST00000315660 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
TSC22D3-201ENST00000315660 IL17REQ8NFR9 667 aa19.51■□□□□ 0.71
TSC22D3-201ENST00000315660 STK31Q9BXU1 1019 aa19.51■□□□□ 0.71
TSC22D3-201ENST00000315660 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
TSC22D3-201ENST00000315660 MEIS3Q99687 375 aa19.51■□□□□ 0.71
TSC22D3-201ENST00000315660 KCNH5Q8NCM2 988 aa19.49■□□□□ 0.71
TSC22D3-201ENST00000315660 BABAM1Q9NWV8 329 aa19.49■□□□□ 0.71
TSC22D3-201ENST00000315660 CCT4P50991 539 aaKnown RBP19.48■□□□□ 0.71
TSC22D3-201ENST00000315660 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
TSC22D3-201ENST00000315660 F6X3S4 739 aa19.48■□□□□ 0.71
TSC22D3-201ENST00000315660 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
TSC22D3-201ENST00000315660 CCDC30Q5VVM6 783 aa19.47■□□□□ 0.71
TSC22D3-201ENST00000315660 SLKQ9H2G2 1235 aaPredicted RBP19.47■□□□□ 0.71
TSC22D3-201ENST00000315660 RBM25P49756 843 aaKnown RBP19.47■□□□□ 0.71
TSC22D3-201ENST00000315660 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
TSC22D3-201ENST00000315660 SLC4A10Q6U841 1118 aa19.47■□□□□ 0.71
TSC22D3-201ENST00000315660 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
TSC22D3-201ENST00000315660 PLEKHM2Q8IWE5 1019 aa19.46■□□□□ 0.71
TSC22D3-201ENST00000315660 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
TSC22D3-201ENST00000315660 ANTXR1Q9H6X2 564 aa19.46■□□□□ 0.71
TSC22D3-201ENST00000315660 EIF5BO60841 1220 aaKnown RBP19.45■□□□□ 0.7
TSC22D3-201ENST00000315660 FAM208AQ9UK61 1670 aaKnown RBP19.45■□□□□ 0.7
TSC22D3-201ENST00000315660 HMMRO75330 724 aa19.45■□□□□ 0.7
TSC22D3-201ENST00000315660 PHRF1Q9P1Y6 1649 aaKnown RBP19.45■□□□□ 0.7
TSC22D3-201ENST00000315660 ZBTB7CA1YPR0 619 aa19.44■□□□□ 0.7
TSC22D3-201ENST00000315660 FLIIQ13045 1269 aa19.44■□□□□ 0.7
TSC22D3-201ENST00000315660 TBC1D9Q6ZT07 1266 aa19.44■□□□□ 0.7
TSC22D3-201ENST00000315660 CEMIPQ8WUJ3 1361 aa19.43■□□□□ 0.7
TSC22D3-201ENST00000315660 GSPT1P15170 499 aaKnown RBP19.43■□□□□ 0.7
TSC22D3-201ENST00000315660 HSCBQ8IWL3 235 aa19.43■□□□□ 0.7
TSC22D3-201ENST00000315660 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
TSC22D3-201ENST00000315660 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
TSC22D3-201ENST00000315660 FKBP5Q13451 457 aaPredicted RBP19.42■□□□□ 0.7
TSC22D3-201ENST00000315660 C16orf71Q8IYS4 520 aaPredicted RBP19.42■□□□□ 0.7
TSC22D3-201ENST00000315660 CDC45O75419 566 aa19.41■□□□□ 0.7
TSC22D3-201ENST00000315660 GCP02774 474 aa19.41■□□□□ 0.7
TSC22D3-201ENST00000315660 ARHGEF25Q86VW2 580 aa19.41■□□□□ 0.7
TSC22D3-201ENST00000315660 SLIT3O75094 1523 aa19.41■□□□□ 0.7
TSC22D3-201ENST00000315660 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
TSC22D3-201ENST00000315660 PROSER2Q86WR7 435 aaPredicted RBP19.4■□□□□ 0.7
TSC22D3-201ENST00000315660 LRRC59Q96AG4 307 aaKnown RBP19.4■□□□□ 0.7
TSC22D3-201ENST00000315660 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
TSC22D3-201ENST00000315660 GNAI2P04899 355 aa19.39■□□□□ 0.69
TSC22D3-201ENST00000315660 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.69
TSC22D3-201ENST00000315660 LGR6Q9HBX8 967 aa19.39■□□□□ 0.69
TSC22D3-201ENST00000315660 RGPD2P0DJD1 1756 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms