RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 WDR17Q8IZU2 1322 aa11.02□□□□□ -0.65
CHD6-201ENST00000309279 CLSTN1O94985 981 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 MTHFSP49914 203 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
CHD6-201ENST00000309279 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
CHD6-201ENST00000309279 ANKRD24Q8TF21 1146 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
CHD6-201ENST00000309279 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 SPATA31A5Q5VU36 1347 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 SPATA31A7Q8IWB4 1347 aa11.01□□□□□ -0.65
CHD6-201ENST00000309279 CDK12Q9NYV4 1490 aaPredicted RBP11.01□□□□□ -0.65
CHD6-201ENST00000309279 CRB1P82279 1406 aa11□□□□□ -0.65
CHD6-201ENST00000309279 SPATA31A1Q5TZJ5 1347 aa11□□□□□ -0.65
CHD6-201ENST00000309279 PPM1GO15355 546 aaPredicted RBP11□□□□□ -0.65
CHD6-201ENST00000309279 PPP2R1AP30153 589 aa11□□□□□ -0.65
CHD6-201ENST00000309279 RBM6P78332 1123 aaKnown RBP11□□□□□ -0.65
CHD6-201ENST00000309279 FAM177A1Q8N128 213 aaPredicted RBP11□□□□□ -0.65
CHD6-201ENST00000309279 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
CHD6-201ENST00000309279 GLI3P10071 1580 aa10.99□□□□□ -0.65
CHD6-201ENST00000309279 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
CHD6-201ENST00000309279 IRX6P78412 446 aaPredicted RBP10.99□□□□□ -0.65
CHD6-201ENST00000309279 CARD10Q9BWT7 1032 aa10.99□□□□□ -0.65
CHD6-201ENST00000309279 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
CHD6-201ENST00000309279 RXRBP28702 533 aa10.98□□□□□ -0.65
CHD6-201ENST00000309279 NEUROD2Q15784 382 aa10.98□□□□□ -0.65
CHD6-201ENST00000309279 TOM1L2Q6ZVM7 507 aa10.98□□□□□ -0.65
CHD6-201ENST00000309279 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
CHD6-201ENST00000309279 THRAP3Q9Y2W1 955 aaKnown RBP10.98□□□□□ -0.65
CHD6-201ENST00000309279 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
CHD6-201ENST00000309279 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
CHD6-201ENST00000309279 FOXD4L5Q5VV16 416 aaPredicted RBP10.98□□□□□ -0.65
CHD6-201ENST00000309279 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
CHD6-201ENST00000309279 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
CHD6-201ENST00000309279 EIF4A2Q14240 407 aaKnown RBP10.97□□□□□ -0.65
CHD6-201ENST00000309279 TCP11L2Q8N4U5 519 aa10.97□□□□□ -0.65
CHD6-201ENST00000309279 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
CHD6-201ENST00000309279 NBPF6Q5VWK0 638 aa10.96□□□□□ -0.65
CHD6-201ENST00000309279 CERS3Q8IU89 383 aa10.96□□□□□ -0.65
CHD6-201ENST00000309279 NBPF4Q96M43 638 aa10.96□□□□□ -0.65
CHD6-201ENST00000309279 PSMD1Q99460 953 aa10.96□□□□□ -0.65
CHD6-201ENST00000309279 CWC22Q9HCG8 908 aaKnown RBP10.96□□□□□ -0.65
CHD6-201ENST00000309279 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.65
CHD6-201ENST00000309279 COL3A1P02461 1466 aaPredicted RBP10.96□□□□□ -0.65
CHD6-201ENST00000309279 NCAPD2Q15021 1401 aa10.96□□□□□ -0.66
CHD6-201ENST00000309279 MYBBP1AQ9BQG0 1328 aaKnown RBP10.96□□□□□ -0.66
CHD6-201ENST00000309279 IL13P35225 146 aa10.95□□□□□ -0.66
CHD6-201ENST00000309279 USP35Q9P2H5 1018 aa10.95□□□□□ -0.66
CHD6-201ENST00000309279 CC2D2BQ6DHV5 1058 aa10.95□□□□□ -0.66
CHD6-201ENST00000309279 EYA1Q99502 592 aa10.95□□□□□ -0.66
CHD6-201ENST00000309279 RGPD1P0DJD0 1748 aa10.94□□□□□ -0.66
CHD6-201ENST00000309279 THSD7AQ9UPZ6 1657 aa10.94□□□□□ -0.66
CHD6-201ENST00000309279 WNK3Q9BYP7 1800 aa10.94□□□□□ -0.66
CHD6-201ENST00000309279 DISP2A7MBM2 1401 aa10.94□□□□□ -0.66
CHD6-201ENST00000309279 DIAPH1O60610 1272 aaKnown RBP10.94□□□□□ -0.66
CHD6-201ENST00000309279 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
CHD6-201ENST00000309279 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
CHD6-201ENST00000309279 CDCA7Q9BWT1 371 aaPredicted RBP10.94□□□□□ -0.66
CHD6-201ENST00000309279 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
CHD6-201ENST00000309279 EP400Q96L91 3159 aa10.93□□□□□ -0.66
CHD6-201ENST00000309279 ANP32CO43423 234 aa10.93□□□□□ -0.66
CHD6-201ENST00000309279 PARP4Q9UKK3 1724 aaKnown RBP10.93□□□□□ -0.66
CHD6-201ENST00000309279 VASPP50552 380 aaPredicted RBP10.92□□□□□ -0.66
CHD6-201ENST00000309279 SEPT12Q8IYM1 358 aa10.92□□□□□ -0.66
CHD6-201ENST00000309279 KDRP35968 1356 aa10.92□□□□□ -0.66
CHD6-201ENST00000309279 RGS12O14924 1447 aa10.92□□□□□ -0.66
CHD6-201ENST00000309279 IL2RBP14784 551 aa10.91□□□□□ -0.66
CHD6-201ENST00000309279 AAMPQ13685 434 aa10.91□□□□□ -0.66
CHD6-201ENST00000309279 TMED8Q6PL24 325 aaPredicted RBP10.91□□□□□ -0.66
CHD6-201ENST00000309279 NAP1L5Q96NT1 182 aaPredicted RBP10.91□□□□□ -0.66
CHD6-201ENST00000309279 BRWD3Q6RI45 1802 aa10.91□□□□□ -0.66
CHD6-201ENST00000309279 APBB1O00213 710 aa10.91□□□□□ -0.66
CHD6-201ENST00000309279 USHBP1Q8N6Y0 703 aa10.91□□□□□ -0.66
CHD6-201ENST00000309279 PLEKHG2Q9H7P9 1386 aa10.91□□□□□ -0.66
CHD6-201ENST00000309279 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 DIEXFQ68CQ4 756 aaKnown RBP10.89□□□□□ -0.67
CHD6-201ENST00000309279 SULT6B1Q6IMI4 303 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 ILDR2Q71H61 639 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 NUDCQ9Y266 331 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 MEGF6O75095 1541 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 OVOS2A0A0G2JMS6 1433 aa10.89□□□□□ -0.67
CHD6-201ENST00000309279 EXOC5O00471 708 aa10.88□□□□□ -0.67
CHD6-201ENST00000309279 DDB1Q16531 1140 aa10.88□□□□□ -0.67
CHD6-201ENST00000309279 AEBP1Q8IUX7 1158 aa10.88□□□□□ -0.67
CHD6-201ENST00000309279 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
CHD6-201ENST00000309279 A0A0U1RQG5 324 aaPredicted RBP10.87□□□□□ -0.67
CHD6-201ENST00000309279 CENPBP07199 599 aaPredicted RBP10.87□□□□□ -0.67
CHD6-201ENST00000309279 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
CHD6-201ENST00000309279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.673e-7■■■□□ 14.7
CHD6-201ENST00000309279 PKD1L3Q7Z443 1732 aa10.87□□□□□ -0.67
CHD6-201ENST00000309279 SHANK3Q9BYB0 1731 aa10.87□□□□□ -0.67
CHD6-201ENST00000309279 TNS2Q63HR2 1409 aa10.87□□□□□ -0.67
CHD6-201ENST00000309279 A0A0G2JS52 829 aa10.87□□□□□ -0.67
CHD6-201ENST00000309279 U2SURPO15042 1029 aaKnown RBP10.87□□□□□ -0.67
CHD6-201ENST00000309279 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
CHD6-201ENST00000309279 TMCO4Q5TGY1 634 aa10.87□□□□□ -0.67
CHD6-201ENST00000309279 KRT27Q7Z3Y8 459 aa10.87□□□□□ -0.67
CHD6-201ENST00000309279 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
CHD6-201ENST00000309279 FCHSD2O94868 740 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms