RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
SYNPO2-201ENST00000307142 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 TDO2P48775 406 aa12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 BECN2A8MW95 431 aa12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 C14orf93Q9H972 538 aaKnown RBP12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 A0A0U1RQG5 324 aaPredicted RBP12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
SYNPO2-201ENST00000307142 BCAR3O75815 825 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 DDB1Q16531 1140 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 NUP153P49790 1475 aaKnown RBP12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 LARP1Q6PKG0 1096 aaKnown RBP12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 CDC45O75419 566 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
SYNPO2-201ENST00000307142 TRAPPC8Q9Y2L5 1435 aa12.83□□□□□ -0.35
SYNPO2-201ENST00000307142 NBPF14Q5TI25 921 aa12.83□□□□□ -0.35
SYNPO2-201ENST00000307142 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 IDH1O75874 414 aaKnown RBP12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 USP5P45974 858 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 SCAF11Q99590 1463 aaKnown RBP12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 MAP3K1Q13233 1512 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 PDE4AP27815 886 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 AAMPQ13685 434 aa12.83□□□□□ -0.36
SYNPO2-201ENST00000307142 EPS15P42566 896 aa12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 DZIP1Q86YF9 867 aaKnown RBP12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 CFAP74Q9C0B2 1584 aa12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 NUP133Q8WUM0 1156 aa12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 A0A087WZG4 1122 aa12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 ATP2B1P20020 1258 aa12.82□□□□□ -0.36
SYNPO2-201ENST00000307142 ABCA5Q8WWZ7 1642 aa12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 POLD1P28340 1107 aa12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 IFIT1P09914 478 aaKnown RBP12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 CHD1O14646 1710 aa12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
SYNPO2-201ENST00000307142 HYPKQ9NX55 129 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 ATP10AO60312 1499 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 IBSPP21815 317 aaPredicted RBP12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 GRM1Q13255 1194 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 GCC1Q96CN9 775 aa12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
SYNPO2-201ENST00000307142 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 SLC5A1P13866 664 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 AIDAQ96BJ3 306 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 GOLGA6L3A6NEY3 463 aa12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
SYNPO2-201ENST00000307142 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 CHMP4BP1P59074 171 aa12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 WDR78Q5VTH9 848 aa12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 MYO5CQ9NQX4 1742 aa12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
SYNPO2-201ENST00000307142 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.36
SYNPO2-201ENST00000307142 UBAC1Q9BSL1 405 aa12.77□□□□□ -0.37
SYNPO2-201ENST00000307142 C22orf23Q9BZE7 217 aa12.77□□□□□ -0.37
SYNPO2-201ENST00000307142 ZNF76P36508 570 aa12.77□□□□□ -0.37
SYNPO2-201ENST00000307142 FBLN1P23142 703 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 SMARCC1Q92922 1105 aaPredicted RBP12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 IL2RBP14784 551 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 STK3Q13188 491 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 CDC5LQ99459 802 aaKnown RBP12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 MKNK2Q9HBH9 465 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 SLF2Q8IX21 1173 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 TXLNAP40222 546 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 CCDC73Q6ZRK6 1079 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms