RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 TRIM5Q9C035 493 aa19.5■□□□□ 0.71
BRD3-201ENST00000303407 JAKMIP1Q96N16 626 aaKnown RBP19.5■□□□□ 0.71
BRD3-201ENST00000303407 MX1P20591 662 aa19.5■□□□□ 0.71
BRD3-201ENST00000303407 CCDC70Q6NSX1 233 aa19.49■□□□□ 0.71
BRD3-201ENST00000303407 RRP12Q5JTH9 1297 aaKnown RBP19.49■□□□□ 0.71
BRD3-201ENST00000303407 IL27Q8NEV9 243 aa19.49■□□□□ 0.71
BRD3-201ENST00000303407 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
BRD3-201ENST00000303407 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
BRD3-201ENST00000303407 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
BRD3-201ENST00000303407 CCDC57Q2TAC2 916 aa19.48■□□□□ 0.71
BRD3-201ENST00000303407 IGHDP01880 384 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 PARD3Q8TEW0 1356 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 TCEAL9Q9UHQ7 104 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 RAB11FIP3O75154 756 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 GPS2Q13227 327 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 F6X3S4 739 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 STK38Q15208 465 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 LARP1BQ659C4 914 aaKnown RBP19.47■□□□□ 0.71
BRD3-201ENST00000303407 BLOC1S2Q6QNY1 142 aa19.47■□□□□ 0.71
BRD3-201ENST00000303407 AMOTL2Q9Y2J4 779 aa19.46■□□□□ 0.71
BRD3-201ENST00000303407 CTDP1Q9Y5B0 961 aaPredicted RBP19.46■□□□□ 0.71
BRD3-201ENST00000303407 PDILTQ8N807 584 aa19.46■□□□□ 0.71
BRD3-201ENST00000303407 KIF1BPQ96EK5 621 aa19.46■□□□□ 0.71
BRD3-201ENST00000303407 ZSCAN31Q96LW9 406 aaPredicted RBP19.46■□□□□ 0.71
BRD3-201ENST00000303407 TNNT3P45378 269 aaPredicted RBP19.45■□□□□ 0.7
BRD3-201ENST00000303407 FKBP4Q02790 459 aaKnown RBP eCLIP19.45■□□□□ 0.74e-6■■■■□ 25.7
BRD3-201ENST00000303407 SMC2O95347 1197 aa19.45■□□□□ 0.7
BRD3-201ENST00000303407 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
BRD3-201ENST00000303407 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
BRD3-201ENST00000303407 CASTP20810 708 aaKnown RBP19.44■□□□□ 0.7
BRD3-201ENST00000303407 MBIPQ9NS73 344 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 ATP2B1P20020 1258 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 KRT85P78386 507 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 PTPRCP08575 1304 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 CCDC192P0DO97 292 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 TNMDQ9H2S6 317 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 IL16Q14005 1332 aa19.44■□□□□ 0.7
BRD3-201ENST00000303407 BCL11BQ9C0K0 894 aaPredicted RBP19.43■□□□□ 0.7
BRD3-201ENST00000303407 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
BRD3-201ENST00000303407 GNL3LQ9NVN8 582 aaKnown RBP19.43■□□□□ 0.7
BRD3-201ENST00000303407 SPC24Q8NBT2 197 aa19.43■□□□□ 0.7
BRD3-201ENST00000303407 SLC3A2P08195 630 aaKnown RBP19.42■□□□□ 0.7
BRD3-201ENST00000303407 MNS1Q8NEH6 495 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 TTC21BQ7Z4L5 1316 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 ZSCAN25Q6NSZ9 544 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 STK11IPQ8N1F8 1099 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 ZNF771Q7L3S4 317 aaPredicted RBP19.42■□□□□ 0.7
BRD3-201ENST00000303407 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
BRD3-201ENST00000303407 A2MP01023 1474 aa19.41■□□□□ 0.7
BRD3-201ENST00000303407 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
BRD3-201ENST00000303407 VSIG10Q8N0Z9 540 aa19.41■□□□□ 0.7
BRD3-201ENST00000303407 LRRFIP2Q9Y608 721 aaKnown RBP19.41■□□□□ 0.7
BRD3-201ENST00000303407 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
BRD3-201ENST00000303407 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
BRD3-201ENST00000303407 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 PHF8Q9UPP1 1060 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 KRT32Q14532 448 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 CCDC69A6NI79 296 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 GLRX3O76003 335 aaKnown RBP19.4■□□□□ 0.7
BRD3-201ENST00000303407 ME1P48163 572 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 SPATA32Q96LK8 384 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 MYD88Q99836 296 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
BRD3-201ENST00000303407 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.7
BRD3-201ENST00000303407 CEP126Q9P2H0 1117 aa19.39■□□□□ 0.7
BRD3-201ENST00000303407 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
BRD3-201ENST00000303407 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
BRD3-201ENST00000303407 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.69
BRD3-201ENST00000303407 CEBPAP49715 358 aaPredicted RBP19.39■□□□□ 0.69
BRD3-201ENST00000303407 MPHOSPH8Q99549 860 aa19.38■□□□□ 0.69
BRD3-201ENST00000303407 PZPP20742 1482 aa19.38■□□□□ 0.69
BRD3-201ENST00000303407 FBLN1P23142 703 aa19.38■□□□□ 0.69
BRD3-201ENST00000303407 PRPF40BQ6NWY9 871 aaKnown RBP19.38■□□□□ 0.69
BRD3-201ENST00000303407 LARP1Q6PKG0 1096 aaKnown RBP19.38■□□□□ 0.69
BRD3-201ENST00000303407 ANO8Q9HCE9 1232 aaPredicted RBP19.38■□□□□ 0.69
BRD3-201ENST00000303407 DNAAF4Q8WXU2 420 aa19.38■□□□□ 0.69
BRD3-201ENST00000303407 ACEP12821 1306 aa19.38■□□□□ 0.69
BRD3-201ENST00000303407 ZNF518AQ6AHZ1 1483 aa19.37■□□□□ 0.69
BRD3-201ENST00000303407 SAMD1Q6SPF0 538 aaPredicted RBP19.37■□□□□ 0.69
BRD3-201ENST00000303407 FLIIQ13045 1269 aa19.37■□□□□ 0.69
BRD3-201ENST00000303407 JMYQ8N9B5 988 aa19.37■□□□□ 0.69
BRD3-201ENST00000303407 ARGLU1Q9NWB6 273 aaPredicted RBP19.37■□□□□ 0.69
BRD3-201ENST00000303407 CTNNA3Q9UI47 895 aa19.37■□□□□ 0.69
BRD3-201ENST00000303407 EIF4G3O43432 1585 aaKnown RBP19.37■□□□□ 0.69
BRD3-201ENST00000303407 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
BRD3-201ENST00000303407 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
BRD3-201ENST00000303407 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
BRD3-201ENST00000303407 TRIM22Q8IYM9 498 aa19.36■□□□□ 0.69
BRD3-201ENST00000303407 CCDC83Q8IWF9 413 aa19.36■□□□□ 0.69
BRD3-201ENST00000303407 NAP1L1P55209 391 aaKnown RBP19.35■□□□□ 0.69
BRD3-201ENST00000303407 TESK2Q96S53 571 aa19.35■□□□□ 0.69
BRD3-201ENST00000303407 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
BRD3-201ENST00000303407 NUTM2BA6NNL0 878 aaPredicted RBP19.35■□□□□ 0.69
BRD3-201ENST00000303407 NUTM2EB1AL46 878 aaPredicted RBP19.35■□□□□ 0.69
BRD3-201ENST00000303407 TEX35Q5T0J7 233 aa19.35■□□□□ 0.69
BRD3-201ENST00000303407 NUTM2AQ8IVF1 878 aaPredicted RBP19.35■□□□□ 0.69
BRD3-201ENST00000303407 BOLA2Q9H3K6 86 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms