RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
CLCC1-201ENST00000302500 EXOC5O00471 708 aa15.58■□□□□ 0.08
CLCC1-201ENST00000302500 PLSCR1O15162 318 aa15.58■□□□□ 0.08
CLCC1-201ENST00000302500 AMPHP49418 695 aa15.58■□□□□ 0.08
CLCC1-201ENST00000302500 KCNQ2O43526 872 aa15.57■□□□□ 0.08
CLCC1-201ENST00000302500 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
CLCC1-201ENST00000302500 APBA3O96018 575 aa15.56■□□□□ 0.08
CLCC1-201ENST00000302500 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
CLCC1-201ENST00000302500 ITGB4P16144 1822 aa15.56■□□□□ 0.08
CLCC1-201ENST00000302500 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
CLCC1-201ENST00000302500 SF3B2Q13435 895 aaKnown RBP15.55■□□□□ 0.08
CLCC1-201ENST00000302500 USHBP1Q8N6Y0 703 aa15.54■□□□□ 0.08
CLCC1-201ENST00000302500 COL3A1P02461 1466 aaPredicted RBP15.54■□□□□ 0.08
CLCC1-201ENST00000302500 IGSF1Q8N6C5 1336 aa15.53■□□□□ 0.08
CLCC1-201ENST00000302500 QSER1Q2KHR3 1735 aa15.53■□□□□ 0.08
CLCC1-201ENST00000302500 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
CLCC1-201ENST00000302500 EIF4A2Q14240 407 aaKnown RBP15.52■□□□□ 0.08
CLCC1-201ENST00000302500 EYA1Q99502 592 aa15.52■□□□□ 0.08
CLCC1-201ENST00000302500 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.08
CLCC1-201ENST00000302500 COL24A1Q17RW2 1714 aa15.51■□□□□ 0.07
CLCC1-201ENST00000302500 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
CLCC1-201ENST00000302500 KDRP35968 1356 aa15.51■□□□□ 0.07
CLCC1-201ENST00000302500 CYP27B1O15528 508 aa15.5■□□□□ 0.07
CLCC1-201ENST00000302500 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
CLCC1-201ENST00000302500 TAF1LQ8IZX4 1826 aa15.49■□□□□ 0.07
CLCC1-201ENST00000302500 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
CLCC1-201ENST00000302500 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
CLCC1-201ENST00000302500 PSDA5PKW4 1024 aaPredicted RBP15.47■□□□□ 0.07
CLCC1-201ENST00000302500 NKX1-1Q15270 411 aaPredicted RBP15.47■□□□□ 0.07
CLCC1-201ENST00000302500 ACSBG1Q96GR2 724 aa15.47■□□□□ 0.07
CLCC1-201ENST00000302500 UTRNP46939 3433 aa15.46■□□□□ 0.07
CLCC1-201ENST00000302500 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.07
CLCC1-201ENST00000302500 R3HDM1Q15032 1099 aaKnown RBP15.46■□□□□ 0.07
CLCC1-201ENST00000302500 LRRC4BQ9NT99 713 aa15.46■□□□□ 0.07
CLCC1-201ENST00000302500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■■■□ 19.3
CLCC1-201ENST00000302500 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
CLCC1-201ENST00000302500 VIRMAQ69YN4 1812 aaKnown RBP15.46■□□□□ 0.06
CLCC1-201ENST00000302500 IL13P35225 146 aa15.45■□□□□ 0.06
CLCC1-201ENST00000302500 TXNRD1Q16881 649 aa15.45■□□□□ 0.06
CLCC1-201ENST00000302500 PCDH11XQ9BZA7 1347 aa15.44■□□□□ 0.06
CLCC1-201ENST00000302500 PCDH11YQ9BZA8 1340 aa15.44■□□□□ 0.06
CLCC1-201ENST00000302500 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
CLCC1-201ENST00000302500 DDX54Q8TDD1 881 aaKnown RBP15.44■□□□□ 0.06
CLCC1-201ENST00000302500 C5P01031 1676 aa15.44■□□□□ 0.06
CLCC1-201ENST00000302500 RAPGEF4Q8WZA2 1011 aa15.43■□□□□ 0.06
CLCC1-201ENST00000302500 ZNF831Q5JPB2 1677 aa15.43■□□□□ 0.06
CLCC1-201ENST00000302500 SCN11AQ9UI33 1791 aa15.43■□□□□ 0.06
CLCC1-201ENST00000302500 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
CLCC1-201ENST00000302500 TATP17735 454 aaPredicted RBP15.43■□□□□ 0.06
CLCC1-201ENST00000302500 PRIM1P49642 420 aaKnown RBP15.43■□□□□ 0.06
CLCC1-201ENST00000302500 PDGFDQ9GZP0 370 aaPredicted RBP15.43■□□□□ 0.06
CLCC1-201ENST00000302500 KDM6AO15550 1401 aaPredicted RBP15.42■□□□□ 0.06
CLCC1-201ENST00000302500 CICQ96RK0 1608 aaPredicted RBP15.42■□□□□ 0.06
CLCC1-201ENST00000302500 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
CLCC1-201ENST00000302500 PHKG2P15735 406 aa15.4■□□□□ 0.06
CLCC1-201ENST00000302500 MTHFSP49914 203 aa15.4■□□□□ 0.06
CLCC1-201ENST00000302500 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
CLCC1-201ENST00000302500 GOLGB1Q14789 3259 aaKnown RBP15.39■□□□□ 0.05
CLCC1-201ENST00000302500 ZNF827Q17R98 1081 aa15.39■□□□□ 0.05
CLCC1-201ENST00000302500 COL5A3P25940 1745 aaPredicted RBP15.38■□□□□ 0.05
CLCC1-201ENST00000302500 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
CLCC1-201ENST00000302500 MRC1P22897 1456 aa15.38■□□□□ 0.05
CLCC1-201ENST00000302500 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
CLCC1-201ENST00000302500 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
CLCC1-201ENST00000302500 SGIP1Q9BQI5 828 aa15.37■□□□□ 0.05
CLCC1-201ENST00000302500 SIPA1L3O60292 1781 aaPredicted RBP15.37■□□□□ 0.05
CLCC1-201ENST00000302500 C4BP0C0L5 1744 aa15.36■□□□□ 0.05
CLCC1-201ENST00000302500 SLC27A3Q5K4L6 730 aa15.36■□□□□ 0.05
CLCC1-201ENST00000302500 PTGER2P43116 358 aa15.35■□□□□ 0.05
CLCC1-201ENST00000302500 PIGBQ92521 554 aa15.35■□□□□ 0.05
CLCC1-201ENST00000302500 SPG7Q9UQ90 795 aa15.35■□□□□ 0.05
CLCC1-201ENST00000302500 KCNQ4P56696 695 aa15.34■□□□□ 0.05
CLCC1-201ENST00000302500 NBPF14Q5TI25 921 aa15.34■□□□□ 0.05
CLCC1-201ENST00000302500 UBR2Q8IWV8 1755 aa15.33■□□□□ 0.04
CLCC1-201ENST00000302500 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
CLCC1-201ENST00000302500 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
CLCC1-201ENST00000302500 IFNL2Q8IZJ0 200 aa15.33■□□□□ 0.04
CLCC1-201ENST00000302500 TJP1Q07157 1748 aa15.33■□□□□ 0.04
CLCC1-201ENST00000302500 MYH14Q7Z406 1995 aaKnown RBP15.33■□□□□ 0.04
CLCC1-201ENST00000302500 PNPLA7Q6ZV29 1317 aa15.32■□□□□ 0.04
CLCC1-201ENST00000302500 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
CLCC1-201ENST00000302500 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
CLCC1-201ENST00000302500 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
CLCC1-201ENST00000302500 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
CLCC1-201ENST00000302500 AMOTQ4VCS5 1084 aa15.29■□□□□ 0.04
CLCC1-201ENST00000302500 MPRIPQ6WCQ1 1025 aa15.29■□□□□ 0.04
CLCC1-201ENST00000302500 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
CLCC1-201ENST00000302500 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
CLCC1-201ENST00000302500 DCAF5Q96JK2 942 aa15.28■□□□□ 0.04
CLCC1-201ENST00000302500 ATG3Q9NT62 314 aa15.28■□□□□ 0.04
CLCC1-201ENST00000302500 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
CLCC1-201ENST00000302500 ASAP1Q9ULH1 1129 aa15.28■□□□□ 0.04
CLCC1-201ENST00000302500 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
CLCC1-201ENST00000302500 PLEKHO1Q53GL0 409 aaPredicted RBP15.27■□□□□ 0.04
CLCC1-201ENST00000302500 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.04
CLCC1-201ENST00000302500 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
CLCC1-201ENST00000302500 HMOX1P09601 288 aa15.26■□□□□ 0.03
CLCC1-201ENST00000302500 ITPK1Q13572 414 aa15.26■□□□□ 0.03
CLCC1-201ENST00000302500 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
CLCC1-201ENST00000302500 MSH5O43196 834 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms