RNA–Protein interactions for RNA: ENST00000295290.12

PACRGL-201, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-201ENST00000295290 USP35Q9P2H5 1018 aa29.23■■■□□ 2.27
PACRGL-201ENST00000295290 GOLGA2Q08379 1002 aa29.22■■■□□ 2.27
PACRGL-201ENST00000295290 AMOTQ4VCS5 1084 aa29.22■■■□□ 2.27
PACRGL-201ENST00000295290 PLEKHO1Q53GL0 409 aaPredicted RBP29.22■■■□□ 2.27
PACRGL-201ENST00000295290 PLEKHG2Q9H7P9 1386 aa29.22■■■□□ 2.27
PACRGL-201ENST00000295290 MEX3CQ5U5Q3 659 aaKnown RBP29.22■■■□□ 2.27
PACRGL-201ENST00000295290 UNC5CLQ8IV45 518 aa29.22■■■□□ 2.27
PACRGL-201ENST00000295290 WDR63Q8IWG1 891 aa29.2■■■□□ 2.27
PACRGL-201ENST00000295290 PARP4Q9UKK3 1724 aaKnown RBP29.2■■■□□ 2.27
PACRGL-201ENST00000295290 OVOS2A0A0G2JMS6 1433 aa29.2■■■□□ 2.26
PACRGL-201ENST00000295290 LMOD3Q0VAK6 560 aa29.2■■■□□ 2.26
PACRGL-201ENST00000295290 SPINK5Q9NQ38 1064 aaPredicted RBP29.2■■■□□ 2.26
PACRGL-201ENST00000295290 IL2RBP14784 551 aa29.18■■■□□ 2.26
PACRGL-201ENST00000295290 PKD1L3Q7Z443 1732 aa29.18■■■□□ 2.26
PACRGL-201ENST00000295290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.18■■■□□ 2.269e-6■□□□□ 9.4
PACRGL-201ENST00000295290 SPATA31A1Q5TZJ5 1347 aa29.17■■■□□ 2.26
PACRGL-201ENST00000295290 THUMPD2Q9BTF0 503 aaKnown RBP29.17■■■□□ 2.26
PACRGL-201ENST00000295290 GNAT3A8MTJ3 354 aa29.16■■■□□ 2.26
PACRGL-201ENST00000295290 SLFN5Q08AF3 891 aa29.16■■■□□ 2.26
PACRGL-201ENST00000295290 DCTN1Q14203 1278 aa29.16■■■□□ 2.26
PACRGL-201ENST00000295290 ZNF530Q6P9A1 599 aaPredicted RBP29.16■■■□□ 2.26
PACRGL-201ENST00000295290 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.16■■■□□ 2.26
PACRGL-201ENST00000295290 MAP3K5Q99683 1374 aa29.16■■■□□ 2.26
PACRGL-201ENST00000295290 SPATA31A5Q5VU36 1347 aa29.16■■■□□ 2.26
PACRGL-201ENST00000295290 SPATA31A7Q8IWB4 1347 aa29.16■■■□□ 2.26
PACRGL-201ENST00000295290 USP21Q9UK80 565 aa29.15■■■□□ 2.26
PACRGL-201ENST00000295290 DISP2A7MBM2 1401 aa29.14■■■□□ 2.26
PACRGL-201ENST00000295290 MCM10Q7L590 875 aa29.14■■■□□ 2.26
PACRGL-201ENST00000295290 SPG7Q9UQ90 795 aa29.14■■■□□ 2.26
PACRGL-201ENST00000295290 HTATSF1O43719 755 aaKnown RBP29.14■■■□□ 2.25
PACRGL-201ENST00000295290 WNK3Q9BYP7 1800 aa29.13■■■□□ 2.25
PACRGL-201ENST00000295290 E9PSI1 815 aa29.13■■■□□ 2.25
PACRGL-201ENST00000295290 VPS72Q15906 364 aa29.13■■■□□ 2.25
PACRGL-201ENST00000295290 AKAP4Q5JQC9 854 aa29.13■■■□□ 2.25
PACRGL-201ENST00000295290 TRMT2AQ8IZ69 625 aaKnown RBP29.13■■■□□ 2.25
PACRGL-201ENST00000295290 RTF1Q92541 710 aaKnown RBP29.12■■■□□ 2.25
PACRGL-201ENST00000295290 AFF2P51816 1311 aa29.12■■■□□ 2.25
PACRGL-201ENST00000295290 THRAP3Q9Y2W1 955 aaKnown RBP29.12■■■□□ 2.25
PACRGL-201ENST00000295290 IL16Q14005 1332 aa29.11■■■□□ 2.25
PACRGL-201ENST00000295290 DUSP27Q5VZP5 1158 aa29.11■■■□□ 2.25
PACRGL-201ENST00000295290 CCDC9Q9Y3X0 531 aaKnown RBP29.11■■■□□ 2.25
PACRGL-201ENST00000295290 C1orf141Q5JVX7 400 aa29.1■■■□□ 2.25
PACRGL-201ENST00000295290 ZCRB1Q8TBF4 217 aaKnown RBP29.1■■■□□ 2.25
PACRGL-201ENST00000295290 IL17REQ8NFR9 667 aa29.09■■■□□ 2.25
PACRGL-201ENST00000295290 SHANK3Q9BYB0 1731 aa29.09■■■□□ 2.25
PACRGL-201ENST00000295290 CALD1Q05682 793 aaKnown RBP29.08■■■□□ 2.25
PACRGL-201ENST00000295290 CYP27B1O15528 508 aa29.08■■■□□ 2.25
PACRGL-201ENST00000295290 PHKG2P15735 406 aa29.08■■■□□ 2.25
PACRGL-201ENST00000295290 LRRC37A3O60309 1634 aa29.08■■■□□ 2.25
PACRGL-201ENST00000295290 IFNL2Q8IZJ0 200 aa29.06■■■□□ 2.24
PACRGL-201ENST00000295290 BARGINQ6ZT62 677 aa29.06■■■□□ 2.24
PACRGL-201ENST00000295290 CEMIPQ8WUJ3 1361 aa29.06■■■□□ 2.24
PACRGL-201ENST00000295290 MPRIPQ6WCQ1 1025 aa29.05■■■□□ 2.24
PACRGL-201ENST00000295290 PCDH11XQ9BZA7 1347 aa29.05■■■□□ 2.24
PACRGL-201ENST00000295290 PCDH11YQ9BZA8 1340 aa29.05■■■□□ 2.24
PACRGL-201ENST00000295290 LGR6Q9HBX8 967 aa29.05■■■□□ 2.24
PACRGL-201ENST00000295290 ADAMTS7Q9UKP4 1686 aa29.05■■■□□ 2.24
PACRGL-201ENST00000295290 ZNF853P0CG23 659 aa29.04■■■□□ 2.24
PACRGL-201ENST00000295290 CDCA7Q9BWT1 371 aaPredicted RBP29.04■■■□□ 2.24
PACRGL-201ENST00000295290 MYH16Q9H6N6 1097 aa29.04■■■□□ 2.24
PACRGL-201ENST00000295290 IFT57Q9NWB7 429 aa29.04■■■□□ 2.24
PACRGL-201ENST00000295290 VIRMAQ69YN4 1812 aaKnown RBP29.03■■■□□ 2.24
PACRGL-201ENST00000295290 CFAP44Q96MT7 982 aa29.02■■■□□ 2.24
PACRGL-201ENST00000295290 ATRNO75882 1429 aa29.02■■■□□ 2.24
PACRGL-201ENST00000295290 FANCIQ9NVI1 1328 aa29.02■■■□□ 2.24
PACRGL-201ENST00000295290 RNMTO43148 476 aaKnown RBP29.02■■■□□ 2.24
PACRGL-201ENST00000295290 TSR2Q969E8 191 aaKnown RBP29.02■■■□□ 2.24
PACRGL-201ENST00000295290 LAS1LQ9Y4W2 734 aaKnown RBP29.02■■■□□ 2.24
PACRGL-201ENST00000295290 GNAI1P63096 354 aa29.01■■■□□ 2.23
PACRGL-201ENST00000295290 KDM6AO15550 1401 aaPredicted RBP29.01■■■□□ 2.23
PACRGL-201ENST00000295290 DDX54Q8TDD1 881 aaKnown RBP29■■■□□ 2.23
PACRGL-201ENST00000295290 GLI3P10071 1580 aa28.99■■■□□ 2.23
PACRGL-201ENST00000295290 TRPC5Q9UL62 973 aaPredicted RBP28.99■■■□□ 2.23
PACRGL-201ENST00000295290 SCN11AQ9UI33 1791 aa28.99■■■□□ 2.23
PACRGL-201ENST00000295290 TNS2Q63HR2 1409 aa28.98■■■□□ 2.23
PACRGL-201ENST00000295290 FAM98CQ17RN3 349 aaKnown RBP28.98■■■□□ 2.23
PACRGL-201ENST00000295290 GJD4Q96KN9 370 aaPredicted RBP28.98■■■□□ 2.23
PACRGL-201ENST00000295290 EXOC5O00471 708 aa28.98■■■□□ 2.23
PACRGL-201ENST00000295290 MBIPQ9NS73 344 aa28.98■■■□□ 2.23
PACRGL-201ENST00000295290 CHL1O00533 1208 aa28.97■■■□□ 2.23
PACRGL-201ENST00000295290 HSP90AB1P08238 724 aaKnown RBP28.97■■■□□ 2.23
PACRGL-201ENST00000295290 DCAF5Q96JK2 942 aa28.97■■■□□ 2.23
PACRGL-201ENST00000295290 NKX1-1Q15270 411 aaPredicted RBP28.96■■■□□ 2.23
PACRGL-201ENST00000295290 DDB1Q16531 1140 aa28.95■■■□□ 2.23
PACRGL-201ENST00000295290 QTRT2Q9H974 415 aaKnown RBP28.94■■■□□ 2.22
PACRGL-201ENST00000295290 TAF7Q15545 349 aaPredicted RBP28.94■■■□□ 2.22
PACRGL-201ENST00000295290 MIS18AQ9NYP9 233 aa28.94■■■□□ 2.22
PACRGL-201ENST00000295290 TEFQ10587 303 aa28.93■■■□□ 2.22
PACRGL-201ENST00000295290 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
PACRGL-201ENST00000295290 THSD7AQ9UPZ6 1657 aa28.92■■■□□ 2.22
PACRGL-201ENST00000295290 MRC1P22897 1456 aa28.91■■■□□ 2.22
PACRGL-201ENST00000295290 EXOSC9Q06265 439 aaKnown RBP28.91■■■□□ 2.22
PACRGL-201ENST00000295290 SLC52A2Q9HAB3 445 aa28.9■■■□□ 2.22
PACRGL-201ENST00000295290 BABAM1Q9NWV8 329 aa28.9■■■□□ 2.22
PACRGL-201ENST00000295290 TSPYL4Q9UJ04 414 aa28.9■■■□□ 2.22
PACRGL-201ENST00000295290 ZNF772Q68DY9 489 aaPredicted RBP28.88■■■□□ 2.21
PACRGL-201ENST00000295290 TOGARAM1Q9Y4F4 1720 aa28.88■■■□□ 2.21
PACRGL-201ENST00000295290 ONECUT3O60422 494 aaPredicted RBP28.87■■■□□ 2.21
PACRGL-201ENST00000295290 RCAN3Q9UKA8 241 aa28.87■■■□□ 2.21
PACRGL-201ENST00000295290 NFATC2IPQ8NCF5 419 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms