RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 SMARCE1Q969G3 411 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 IRX1P78414 480 aaPredicted RBP10.18□□□□□ -0.78
A1CF-201ENST00000282641 GBP6Q6ZN66 633 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 NOC3LQ8WTT2 800 aaKnown RBP10.18□□□□□ -0.78
A1CF-201ENST00000282641 SIN3AQ96ST3 1273 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 PCF11O94913 1555 aaKnown RBP10.18□□□□□ -0.78
A1CF-201ENST00000282641 MOV10L1Q9BXT6 1211 aaKnown RBP10.18□□□□□ -0.78
A1CF-201ENST00000282641 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 DYDC1Q8WWB3 177 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 ARFGAP3Q9NP61 516 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 TPD52L1Q16890 204 aaPredicted RBP10.18□□□□□ -0.78
A1CF-201ENST00000282641 EXOC4Q96A65 974 aa10.18□□□□□ -0.78
A1CF-201ENST00000282641 CARMIL2Q6F5E8 1435 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 DDX12PQ92771 950 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 BAG4O95429 457 aaKnown RBP10.17□□□□□ -0.78
A1CF-201ENST00000282641 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 ARFGAP2Q8N6H7 521 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 SATB1Q01826 763 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 NOLC1Q14978 699 aaKnown RBP eCLIP10.17□□□□□ -0.78
A1CF-201ENST00000282641 ZNF396Q96N95 335 aaPredicted RBP10.17□□□□□ -0.78
A1CF-201ENST00000282641 SLU7O95391 586 aaKnown RBP10.17□□□□□ -0.78
A1CF-201ENST00000282641 FYB1O15117 783 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 IQCDQ96DY2 449 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 RAI14Q9P0K7 980 aa10.17□□□□□ -0.78
A1CF-201ENST00000282641 IFFO1Q0D2I5 559 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 GAPVD1Q14C86 1478 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 CNPY4Q8N129 248 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 TTC36A6NLP5 189 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 CCDC172P0C7W6 258 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 OS9Q13438 667 aaPredicted RBP10.16□□□□□ -0.78
A1CF-201ENST00000282641 CENPHQ9H3R5 247 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 FKBP5Q13451 457 aaPredicted RBP10.16□□□□□ -0.78
A1CF-201ENST00000282641 SPATS2LQ9NUQ6 558 aaKnown RBP10.16□□□□□ -0.78
A1CF-201ENST00000282641 SETDB1Q15047 1291 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 AP1ARQ63HQ0 302 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 CFAP45Q9UL16 551 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 KDM2BQ8NHM5 1336 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 KCNJ6P48051 423 aa10.16□□□□□ -0.78
A1CF-201ENST00000282641 NAP1L3Q99457 506 aaPredicted RBP10.16□□□□□ -0.78
A1CF-201ENST00000282641 ASXL2Q76L83 1435 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
A1CF-201ENST00000282641 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 KINO60870 393 aaKnown RBP10.15□□□□□ -0.78
A1CF-201ENST00000282641 KRT85P78386 507 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 ITPRIPQ8IWB1 547 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 GDAP1L1Q96MZ0 367 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 ZNF853P0CG23 659 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 NLRP5P59047 1200 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 MMS22LQ6ZRQ5 1243 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 TRIM5Q9C035 493 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 ALDH1L2Q3SY69 923 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 RRP12Q5JTH9 1297 aaKnown RBP10.15□□□□□ -0.78
A1CF-201ENST00000282641 LRCH2Q5VUJ6 765 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 NUCKS1Q9H1E3 243 aaKnown RBP10.15□□□□□ -0.78
A1CF-201ENST00000282641 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
A1CF-201ENST00000282641 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.79
A1CF-201ENST00000282641 EBAG9O00559 213 aa10.15□□□□□ -0.79
A1CF-201ENST00000282641 MNAT1P51948 309 aa10.15□□□□□ -0.79
A1CF-201ENST00000282641 NBPF9Q3BBW0 867 aa10.15□□□□□ -0.79
A1CF-201ENST00000282641 MAP3K5Q99683 1374 aa10.15□□□□□ -0.79
A1CF-201ENST00000282641 ERLIN2O94905 339 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 MAP3K11Q16584 847 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
A1CF-201ENST00000282641 UBE2HP62256 183 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 CCDC27Q2M243 656 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 APBA1Q02410 837 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 BRD3Q15059 726 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 SPATA24Q86W54 205 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 PSMD7P51665 324 aa10.14□□□□□ -0.79
A1CF-201ENST00000282641 CEP89Q96ST8 783 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 CEP83Q9Y592 693 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 TNNT1P13805 278 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 FCHSD1Q86WN1 690 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 DHX16O60231 1041 aaKnown RBP10.13□□□□□ -0.79
A1CF-201ENST00000282641 TNPO1Q92973 898 aaKnown RBP10.13□□□□□ -0.79
A1CF-201ENST00000282641 ARHGAP45Q92619 1136 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 RUNDC1Q96C34 613 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 FILIP1LQ4L180 1135 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 STMN4Q9H169 189 aaPredicted RBP10.13□□□□□ -0.79
A1CF-201ENST00000282641 CCHCR1Q8TD31 782 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 SMARCC1Q92922 1105 aaPredicted RBP10.13□□□□□ -0.79
A1CF-201ENST00000282641 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 PLEKHD1A6NEE1 506 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 IMPACTQ9P2X3 320 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
A1CF-201ENST00000282641 GFM2Q969S9 779 aaKnown RBP10.13□□□□□ -0.79
A1CF-201ENST00000282641 SPECC1LQ69YQ0 1117 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 FAM114A1Q8IWE2 563 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 RTF1Q92541 710 aaKnown RBP10.12□□□□□ -0.79
A1CF-201ENST00000282641 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
A1CF-201ENST00000282641 GOLIM4O00461 696 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 LRRCC1Q9C099 1032 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 CKAP4Q07065 602 aaKnown RBP10.12□□□□□ -0.79
A1CF-201ENST00000282641 LZICQ8WZA0 190 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 ZHX1Q9UKY1 873 aaPredicted RBP10.12□□□□□ -0.79
A1CF-201ENST00000282641 OPA1O60313 960 aa10.12□□□□□ -0.79
A1CF-201ENST00000282641 SEPT14Q6ZU15 432 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms