RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 BRD4O60885 1362 aaPredicted RBP19.75■□□□□ 0.75
TSPAN3-201ENST00000267970 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 CKAP2LQ8IYA6 745 aa19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 URI1O94763 535 aaPredicted RBP19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 UBXN4Q92575 508 aa19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 PRAM1Q96QH2 718 aa19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 TRMT1LQ7Z2T5 733 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 DACH1Q9UI36 760 aa19.74■□□□□ 0.75
TSPAN3-201ENST00000267970 ARHGAP29Q52LW3 1261 aa19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 SOGA3Q5TF21 947 aa19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 CBFA2T2O43439 604 aa19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 MVPQ14764 893 aaKnown RBP19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 TMCO3Q6UWJ1 677 aa19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-201ENST00000267970 CEP57L1Q8IYX8 460 aa19.72■□□□□ 0.75
TSPAN3-201ENST00000267970 C20orf194Q5TEA3 1177 aa19.72■□□□□ 0.75
TSPAN3-201ENST00000267970 C16orf45Q96MC5 204 aaPredicted RBP19.72■□□□□ 0.75
TSPAN3-201ENST00000267970 RNF187Q5TA31 235 aaPredicted RBP19.72■□□□□ 0.75
TSPAN3-201ENST00000267970 CCDC97Q96F63 343 aaPredicted RBP19.72■□□□□ 0.75
TSPAN3-201ENST00000267970 ERC1Q8IUD2 1116 aa19.72■□□□□ 0.75
TSPAN3-201ENST00000267970 IDH1O75874 414 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 CASQ1P31415 396 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 GBP2P32456 591 aaPredicted RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 NACADO15069 1562 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 CABP4P57796 275 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 TMEM57Q8N5G2 664 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 CFAP45Q9UL16 551 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 SSFA2P28290 1259 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 RRP9O43818 475 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 NF2P35240 595 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 SERPINA10Q9UK55 444 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 MAP3K11Q16584 847 aa19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 RBM27Q9P2N5 1060 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-201ENST00000267970 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 GAS2L2Q8NHY3 880 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 ANKRD1Q15327 319 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 SLC4A8Q2Y0W8 1093 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 MAP2K1Q02750 393 aaPredicted RBP19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 CCDC178Q5BJE1 867 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 TTC16Q8NEE8 873 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 GTF2F1P35269 517 aaKnown RBP eCLIP19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 USP25Q9UHP3 1055 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 ZNF76P36508 570 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 UBA5Q9GZZ9 404 aa19.7■□□□□ 0.74
TSPAN3-201ENST00000267970 PTPN14Q15678 1187 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 SRCIN1Q9C0H9 1055 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 BIN1O00499 593 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 PLEKHO1Q53GL0 409 aaPredicted RBP19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 RAB11FIP4Q86YS3 637 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 ZSWIM4Q9H7M6 989 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 CCDC57Q2TAC2 916 aa19.69■□□□□ 0.74
TSPAN3-201ENST00000267970 TAF4BQ92750 862 aa19.68■□□□□ 0.74
TSPAN3-201ENST00000267970 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
TSPAN3-201ENST00000267970 MPHOSPH8Q99549 860 aa19.68■□□□□ 0.74
TSPAN3-201ENST00000267970 UBAC1Q9BSL1 405 aa19.68■□□□□ 0.74
TSPAN3-201ENST00000267970 NACAP1Q9BZK3 213 aa19.68■□□□□ 0.74
TSPAN3-201ENST00000267970 NOL7Q9UMY1 257 aaKnown RBP19.68■□□□□ 0.74
TSPAN3-201ENST00000267970 CRACR2AQ9BSW2 395 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 PDE3AQ14432 1141 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 ZNF830Q96NB3 372 aaPredicted RBP19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 LUC7LQ9NQ29 371 aaKnown RBP19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 NEBLO76041 1014 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 ZSCAN30Q86W11 494 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 CCDC148Q8NFR7 591 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 ABCF2Q9UG63 623 aa19.67■□□□□ 0.74
TSPAN3-201ENST00000267970 CCDC144CPQ8IYA2 1237 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 CTNNBL1Q8WYA6 563 aaPredicted RBP19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 CLIP2Q9UDT6 1046 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 MACROD2A1Z1Q3 448 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 USP8P40818 1118 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 PPP4R3BQ5MIZ7 849 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 BOLA2Q9H3K6 86 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 GNL3LQ9NVN8 582 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 MINDY4BA8MYZ0 360 aa19.66■□□□□ 0.74
TSPAN3-201ENST00000267970 ATP2C2O75185 946 aa19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 KIF4BQ2VIQ3 1234 aa19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 ZNF530Q6P9A1 599 aaPredicted RBP19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 PANK2Q9BZ23 570 aa19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 CCT4P50991 539 aaKnown RBP19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 LRP2BPQ9P2M1 347 aa19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 PDS5BQ9NTI5 1447 aa19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 PSMD1Q99460 953 aa19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 CCT2P78371 535 aaKnown RBP19.65■□□□□ 0.74
TSPAN3-201ENST00000267970 LIG1P18858 919 aa19.64■□□□□ 0.74
TSPAN3-201ENST00000267970 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.64■□□□□ 0.73
TSPAN3-201ENST00000267970 BTBD11A6QL63 1104 aa19.64■□□□□ 0.73
TSPAN3-201ENST00000267970 FAM107BQ9H098 131 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms