RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 MCM10Q7L590 875 aa18.75■□□□□ 0.59
SHANK3-201ENST00000262795 GNAT3A8MTJ3 354 aa18.75■□□□□ 0.59
SHANK3-201ENST00000262795 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
SHANK3-201ENST00000262795 RANBP6O60518 1105 aaKnown RBP18.75■□□□□ 0.59
SHANK3-201ENST00000262795 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
SHANK3-201ENST00000262795 STK38Q15208 465 aa18.74■□□□□ 0.59
SHANK3-201ENST00000262795 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-201ENST00000262795 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-201ENST00000262795 PNISRQ8TF01 805 aaKnown RBP18.74■□□□□ 0.59
SHANK3-201ENST00000262795 DEF6Q9H4E7 631 aa18.74■□□□□ 0.59
SHANK3-201ENST00000262795 SRGAP3O43295 1099 aa18.74■□□□□ 0.59
SHANK3-201ENST00000262795 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
SHANK3-201ENST00000262795 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
SHANK3-201ENST00000262795 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 LMTK3Q96Q04 1460 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 NBPF6Q5VWK0 638 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 NBPF5PQ86XG9 351 aaPredicted RBP18.73■□□□□ 0.59
SHANK3-201ENST00000262795 NBPF4Q96M43 638 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 SAMM50Q9Y512 469 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 NFKBIBQ15653 356 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 CUL5Q93034 780 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 LMOD1P29536 600 aaPredicted RBP18.73■□□□□ 0.59
SHANK3-201ENST00000262795 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
SHANK3-201ENST00000262795 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
SHANK3-201ENST00000262795 CWC27Q6UX04 472 aaKnown RBP18.72■□□□□ 0.59
SHANK3-201ENST00000262795 DESP17661 470 aa18.72■□□□□ 0.59
SHANK3-201ENST00000262795 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
SHANK3-201ENST00000262795 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
SHANK3-201ENST00000262795 ANKRD50Q9ULJ7 1429 aa18.72■□□□□ 0.59
SHANK3-201ENST00000262795 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.72■□□□□ 0.59
SHANK3-201ENST00000262795 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 CHMP5Q9NZZ3 219 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 GPR162Q16538 588 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 GPS2Q13227 327 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 CABLES1Q8TDN4 633 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 HMGB2P26583 209 aaKnown RBP18.71■□□□□ 0.59
SHANK3-201ENST00000262795 PICALMQ13492 652 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 SEPT7Q16181 437 aaKnown RBP18.71■□□□□ 0.59
SHANK3-201ENST00000262795 FAM43AQ8N2R8 423 aa18.71■□□□□ 0.59
SHANK3-201ENST00000262795 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
SHANK3-201ENST00000262795 PARP3Q9Y6F1 533 aa18.7■□□□□ 0.58
SHANK3-201ENST00000262795 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-201ENST00000262795 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
SHANK3-201ENST00000262795 ZNF354CQ86Y25 554 aa18.7■□□□□ 0.58
SHANK3-201ENST00000262795 FILIP1LQ4L180 1135 aa18.69■□□□□ 0.58
SHANK3-201ENST00000262795 HIP1O00291 1037 aa18.69■□□□□ 0.58
SHANK3-201ENST00000262795 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
SHANK3-201ENST00000262795 PRKG1Q13976 671 aa18.69■□□□□ 0.58
SHANK3-201ENST00000262795 NF2P35240 595 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 BMP2KQ9NSY1 1161 aaPredicted RBP18.68■□□□□ 0.58
SHANK3-201ENST00000262795 MSH6P52701 1360 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 IFIT5Q13325 482 aaKnown RBP18.68■□□□□ 0.58
SHANK3-201ENST00000262795 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 CDC45O75419 566 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 CKAP2LQ8IYA6 745 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
SHANK3-201ENST00000262795 NOL7Q9UMY1 257 aaKnown RBP18.68■□□□□ 0.58
SHANK3-201ENST00000262795 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
SHANK3-201ENST00000262795 NAT10Q9H0A0 1025 aaKnown RBP18.67■□□□□ 0.58
SHANK3-201ENST00000262795 NEK4P51957 841 aa18.67■□□□□ 0.58
SHANK3-201ENST00000262795 SLC5A1P13866 664 aa18.67■□□□□ 0.58
SHANK3-201ENST00000262795 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
SHANK3-201ENST00000262795 ATP5J2-PTCD1G3V325 749 aa18.67■□□□□ 0.58
SHANK3-201ENST00000262795 KINO60870 393 aaKnown RBP18.66■□□□□ 0.58
SHANK3-201ENST00000262795 NCKAP5LQ9HCH0 1330 aa18.66■□□□□ 0.58
SHANK3-201ENST00000262795 IQSEC3Q9UPP2 1182 aaPredicted RBP18.66■□□□□ 0.58
SHANK3-201ENST00000262795 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
SHANK3-201ENST00000262795 COMMD10Q9Y6G5 202 aa18.66■□□□□ 0.58
SHANK3-201ENST00000262795 ENOX2Q16206 610 aaKnown RBP18.66■□□□□ 0.58
SHANK3-201ENST00000262795 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 STIM1Q13586 685 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 ZNF287Q9HBT7 754 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 FIBPO43427 364 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 MNS1Q8NEH6 495 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 ME1P48163 572 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 TEX35Q5T0J7 233 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 CCDC144CPQ8IYA2 1237 aa18.65■□□□□ 0.58
SHANK3-201ENST00000262795 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
SHANK3-201ENST00000262795 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
SHANK3-201ENST00000262795 OGFOD1Q8N543 542 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 ANKRD18BA2A2Z9 1011 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 ANAPC15P60006 121 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 JAG2Q9Y219 1238 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 SLC52A1Q9NWF4 448 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 HDAC9Q9UKV0 1011 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 DDX11Q96FC9 970 aa18.64■□□□□ 0.57
SHANK3-201ENST00000262795 SMARCE1Q969G3 411 aa18.63■□□□□ 0.57
SHANK3-201ENST00000262795 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SHANK3-201ENST00000262795 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.63■□□□□ 0.57
SHANK3-201ENST00000262795 LRPPRCP42704 1394 aaKnown RBP18.63■□□□□ 0.57
SHANK3-201ENST00000262795 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
SHANK3-201ENST00000262795 ZNF396Q96N95 335 aaPredicted RBP18.63■□□□□ 0.57
SHANK3-201ENST00000262795 TNNT1P13805 278 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms