RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 ARHGAP23Q9P227 1491 aa21.51■■□□□ 1.03
RHBDF1-201ENST00000262316 PEAK1Q9H792 1746 aa21.51■■□□□ 1.03
RHBDF1-201ENST00000262316 FRAT2O75474 233 aaPredicted RBP21.51■■□□□ 1.03
RHBDF1-201ENST00000262316 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
RHBDF1-201ENST00000262316 SSH2Q76I76 1423 aa21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 USP31Q70CQ4 1352 aa21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 RIMS1Q86UR5 1692 aaKnown RBP21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 IL17REQ8NFR9 667 aa21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 KNDC1Q76NI1 1749 aa21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
RHBDF1-201ENST00000262316 AKAP12Q02952 1782 aa21.49■■□□□ 1.03
RHBDF1-201ENST00000262316 NBPF6Q5VWK0 638 aa21.49■■□□□ 1.03
RHBDF1-201ENST00000262316 OTUD7AQ8TE49 926 aaPredicted RBP21.49■■□□□ 1.03
RHBDF1-201ENST00000262316 NBPF4Q96M43 638 aa21.49■■□□□ 1.03
RHBDF1-201ENST00000262316 ABCC4O15439 1325 aa21.49■■□□□ 1.03
RHBDF1-201ENST00000262316 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
RHBDF1-201ENST00000262316 SLIT1O75093 1534 aa21.48■■□□□ 1.03
RHBDF1-201ENST00000262316 ARHGAP45Q92619 1136 aa21.48■■□□□ 1.03
RHBDF1-201ENST00000262316 LGR6Q9HBX8 967 aa21.48■■□□□ 1.03
RHBDF1-201ENST00000262316 PROSER2Q86WR7 435 aaPredicted RBP21.48■■□□□ 1.03
RHBDF1-201ENST00000262316 ANXA1P04083 346 aa21.47■■□□□ 1.03
RHBDF1-201ENST00000262316 C22orf23Q9BZE7 217 aa21.47■■□□□ 1.03
RHBDF1-201ENST00000262316 ZC3H6P61129 1189 aaKnown RBP21.47■■□□□ 1.03
RHBDF1-201ENST00000262316 GNAT3A8MTJ3 354 aa21.46■■□□□ 1.03
RHBDF1-201ENST00000262316 TBC1D32Q96NH3 1257 aa21.46■■□□□ 1.03
RHBDF1-201ENST00000262316 IGSF1Q8N6C5 1336 aa21.45■■□□□ 1.02
RHBDF1-201ENST00000262316 FKBP5Q13451 457 aaPredicted RBP21.45■■□□□ 1.02
RHBDF1-201ENST00000262316 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
RHBDF1-201ENST00000262316 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
RHBDF1-201ENST00000262316 KCNQ3O43525 872 aa21.45■■□□□ 1.02
RHBDF1-201ENST00000262316 BRPF1P55201 1214 aaPredicted RBP21.45■■□□□ 1.02
RHBDF1-201ENST00000262316 MPRIPQ6WCQ1 1025 aa21.44■■□□□ 1.02
RHBDF1-201ENST00000262316 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
RHBDF1-201ENST00000262316 PTCH1Q13635 1447 aa21.44■■□□□ 1.02
RHBDF1-201ENST00000262316 FOXD4L1Q9NU39 408 aa21.43■■□□□ 1.02
RHBDF1-201ENST00000262316 TSHZ3Q63HK5 1081 aa21.42■■□□□ 1.02
RHBDF1-201ENST00000262316 MSH6P52701 1360 aa21.42■■□□□ 1.02
RHBDF1-201ENST00000262316 CRB1P82279 1406 aa21.42■■□□□ 1.02
RHBDF1-201ENST00000262316 STK31Q9BXU1 1019 aa21.42■■□□□ 1.02
RHBDF1-201ENST00000262316 HSPA2P54652 639 aa21.41■■□□□ 1.02
RHBDF1-201ENST00000262316 CABLES1Q8TDN4 633 aa21.41■■□□□ 1.02
RHBDF1-201ENST00000262316 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
RHBDF1-201ENST00000262316 BECN1Q14457 450 aa21.4■■□□□ 1.02
RHBDF1-201ENST00000262316 ARHGEF10O15013 1369 aa21.4■■□□□ 1.02
RHBDF1-201ENST00000262316 GCC1Q96CN9 775 aa21.39■■□□□ 1.01
RHBDF1-201ENST00000262316 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.01
RHBDF1-201ENST00000262316 GCP02774 474 aa21.39■■□□□ 1.01
RHBDF1-201ENST00000262316 INTS3Q68E01 1043 aaKnown RBP21.39■■□□□ 1.01
RHBDF1-201ENST00000262316 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
RHBDF1-201ENST00000262316 AXIN2Q9Y2T1 843 aa21.38■■□□□ 1.01
RHBDF1-201ENST00000262316 CEP85Q6P2H3 762 aa21.38■■□□□ 1.01
RHBDF1-201ENST00000262316 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
RHBDF1-201ENST00000262316 ARXQ96QS3 562 aa21.37■■□□□ 1.01
RHBDF1-201ENST00000262316 TOPAZ1Q8N9V7 1692 aa21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 FLIIQ13045 1269 aa21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 TAF7Q15545 349 aaPredicted RBP21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 IP6K1Q92551 441 aa21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 KRT28Q7Z3Y7 464 aa21.36■■□□□ 1.01
RHBDF1-201ENST00000262316 PIK3C2AO00443 1686 aa21.35■■□□□ 1.01
RHBDF1-201ENST00000262316 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
RHBDF1-201ENST00000262316 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
RHBDF1-201ENST00000262316 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
RHBDF1-201ENST00000262316 PLEKHM2Q8IWE5 1019 aa21.34■■□□□ 1.01
RHBDF1-201ENST00000262316 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1.01
RHBDF1-201ENST00000262316 ANKRD44Q8N8A2 993 aa21.33■■□□□ 1.01
RHBDF1-201ENST00000262316 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
RHBDF1-201ENST00000262316 KDRP35968 1356 aa21.33■■□□□ 1.01
RHBDF1-201ENST00000262316 RGS12O14924 1447 aa21.33■■□□□ 1
RHBDF1-201ENST00000262316 CHRNA2Q15822 529 aa21.33■■□□□ 1
RHBDF1-201ENST00000262316 CCDC30Q5VVM6 783 aa21.32■■□□□ 1
RHBDF1-201ENST00000262316 TEFQ10587 303 aa21.31■■□□□ 1
RHBDF1-201ENST00000262316 ANKRD24Q8TF21 1146 aa21.31■■□□□ 1
RHBDF1-201ENST00000262316 RTL1A6NKG5 1358 aa21.31■■□□□ 1
RHBDF1-201ENST00000262316 KIAA0232Q92628 1395 aa21.31■■□□□ 1
RHBDF1-201ENST00000262316 MAP3K5Q99683 1374 aa21.31■■□□□ 1
RHBDF1-201ENST00000262316 HAP1P54257 671 aaPredicted RBP21.31■■□□□ 1
RHBDF1-201ENST00000262316 PNMA6EA0A0J9YXQ4 647 aa21.3■■□□□ 1
RHBDF1-201ENST00000262316 PTPRCP08575 1304 aa21.3■■□□□ 1
RHBDF1-201ENST00000262316 BMP2KLQ5H9B9 411 aa21.3■■□□□ 1
RHBDF1-201ENST00000262316 NLRP2Q9NX02 1062 aa21.29■■□□□ 1
RHBDF1-201ENST00000262316 LRRFIP2Q9Y608 721 aaKnown RBP21.29■■□□□ 1
RHBDF1-201ENST00000262316 CHPF2Q9P2E5 772 aa21.29■■□□□ 1
RHBDF1-201ENST00000262316 NPHP4O75161 1426 aaPredicted RBP21.29■■□□□ 1
RHBDF1-201ENST00000262316 ANKARQ7Z5J8 1434 aa21.29■■□□□ 1
RHBDF1-201ENST00000262316 BTBD11A6QL63 1104 aa21.28■■□□□ 1
RHBDF1-201ENST00000262316 CD2BP2O95400 341 aaKnown RBP21.27■■□□□ 1
RHBDF1-201ENST00000262316 SLC39A6Q13433 755 aa21.27■■□□□ 1
RHBDF1-201ENST00000262316 RPAP2Q8IXW5 612 aaPredicted RBP21.27■■□□□ 1
RHBDF1-201ENST00000262316 IL1RAPL2Q9NP60 686 aa21.27■■□□□ 1
RHBDF1-201ENST00000262316 PIP4K2AP48426 406 aaPredicted RBP21.27■□□□□ 0.99
RHBDF1-201ENST00000262316 XRN1Q8IZH2 1706 aaKnown RBP21.26■□□□□ 0.99
RHBDF1-201ENST00000262316 CSB-PGBD3P0DP91 1061 aa21.26■□□□□ 0.99
RHBDF1-201ENST00000262316 AIMP1Q12904 312 aaKnown RBP21.26■□□□□ 0.99
RHBDF1-201ENST00000262316 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
RHBDF1-201ENST00000262316 GNAI2P04899 355 aa21.25■□□□□ 0.99
RHBDF1-201ENST00000262316 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
RHBDF1-201ENST00000262316 ATF3P18847 181 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms