RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 ANAPC15P60006 121 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
CCNT1-201ENST00000261900 DACH1Q9UI36 760 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 SLC5A1P13866 664 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
CCNT1-201ENST00000261900 SPINK5Q9NQ38 1064 aaPredicted RBP9.93□□□□□ -0.82
CCNT1-201ENST00000261900 PPP1R42Q7Z4L9 355 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 MAP3K12Q12852 859 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 TTLL5Q6EMB2 1281 aa9.93□□□□□ -0.82
CCNT1-201ENST00000261900 SMARCC1Q92922 1105 aaPredicted RBP9.93□□□□□ -0.82
CCNT1-201ENST00000261900 LARP1Q6PKG0 1096 aaKnown RBP9.92□□□□□ -0.82
CCNT1-201ENST00000261900 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 STK32BQ9NY57 414 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 RAB34Q9BZG1 259 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 TFCP2L1Q9NZI6 479 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 ATAD2Q6PL18 1390 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 KIF7Q2M1P5 1343 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 ZNF644Q9H582 1327 aaPredicted RBP9.92□□□□□ -0.82
CCNT1-201ENST00000261900 BAG3O95817 575 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 NBPF6Q5VWK0 638 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 NBPF5PQ86XG9 351 aaPredicted RBP9.92□□□□□ -0.82
CCNT1-201ENST00000261900 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
CCNT1-201ENST00000261900 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 TRAF1Q13077 416 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 ARGLU1Q9NWB6 273 aaPredicted RBP9.92□□□□□ -0.82
CCNT1-201ENST00000261900 EPB41L2O43491 1005 aaKnown RBP9.92□□□□□ -0.82
CCNT1-201ENST00000261900 AACSQ86V21 672 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 PIBF1Q8WXW3 757 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 FERMT2Q96AC1 680 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 COMMD10Q9Y6G5 202 aa9.92□□□□□ -0.82
CCNT1-201ENST00000261900 MINDY4BA8MYZ0 360 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 KRT28Q7Z3Y7 464 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 CTCFLQ8NI51 663 aaPredicted RBP9.91□□□□□ -0.82
CCNT1-201ENST00000261900 ERCC4Q92889 916 aaPredicted RBP9.91□□□□□ -0.82
CCNT1-201ENST00000261900 PARP3Q9Y6F1 533 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 GNAT3A8MTJ3 354 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 CYP46A1Q9Y6A2 500 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 ANKRD18BA2A2Z9 1011 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 MCM2P49736 904 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 SPTY2D1Q68D10 685 aaPredicted RBP9.91□□□□□ -0.82
CCNT1-201ENST00000261900 SRGAP3O43295 1099 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 IQCA1Q86XH1 822 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 FMNL2Q96PY5 1086 aa9.91□□□□□ -0.82
CCNT1-201ENST00000261900 CCDC191Q8NCU4 936 aa9.9□□□□□ -0.82
CCNT1-201ENST00000261900 IMMTQ16891 758 aaKnown RBP9.9□□□□□ -0.82
CCNT1-201ENST00000261900 AMOTL2Q9Y2J4 779 aa9.9□□□□□ -0.82
CCNT1-201ENST00000261900 TEX35Q5T0J7 233 aa9.9□□□□□ -0.82
CCNT1-201ENST00000261900 LRRCC1Q9C099 1032 aa9.9□□□□□ -0.82
CCNT1-201ENST00000261900 NAPBQ9H115 298 aa9.9□□□□□ -0.83
CCNT1-201ENST00000261900 PRKRIP1Q9H875 184 aaPredicted RBP9.89□□□□□ -0.83
CCNT1-201ENST00000261900 CCDC196A0A1B0GTZ2 297 aa9.89□□□□□ -0.83
CCNT1-201ENST00000261900 RRP1P56182 461 aaKnown RBP9.89□□□□□ -0.83
CCNT1-201ENST00000261900 CCDC112Q8NEF3 446 aa9.89□□□□□ -0.83
CCNT1-201ENST00000261900 TAF12Q16514 161 aa9.89□□□□□ -0.83
CCNT1-201ENST00000261900 HOMER2Q9NSB8 354 aa9.89□□□□□ -0.83
CCNT1-201ENST00000261900 KRT32Q14532 448 aa9.89□□□□□ -0.83
CCNT1-201ENST00000261900 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
CCNT1-201ENST00000261900 SLC12A5Q9H2X9 1139 aa9.89□□□□□ -0.83
CCNT1-201ENST00000261900 LIG1P18858 919 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 TMEM266Q2M3C6 531 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 CNTLNQ9NXG0 1405 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 CEBPAP49715 358 aaPredicted RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 PPFIBP1Q86W92 1011 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 RNF41Q9H4P4 317 aaPredicted RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 LRRFIP2Q9Y608 721 aaKnown RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 KIF20AO95235 890 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 SSX2IPQ9Y2D8 614 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 FGD5Q6ZNL6 1462 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 BAG4O95429 457 aaKnown RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 RRS1Q15050 365 aaKnown RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 DDB1Q16531 1140 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 TTC21AQ8NDW8 1320 aa9.88□□□□□ -0.83
CCNT1-201ENST00000261900 EXOSC9Q06265 439 aaKnown RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 UTP14AQ9BVJ6 771 aaKnown RBP9.88□□□□□ -0.83
CCNT1-201ENST00000261900 NEK4P51957 841 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 CCDC7Q96M83 1385 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 BLOC1S2Q6QNY1 142 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 CEP131Q9UPN4 1083 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 ANKRD30BQ9BXX2 1392 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 RANBP6O60518 1105 aaKnown RBP9.87□□□□□ -0.83
CCNT1-201ENST00000261900 GPTP24298 496 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 BAG6P46379 1132 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 GPR162Q16538 588 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
CCNT1-201ENST00000261900 NPHP3Q7Z494 1330 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 GBP2P32456 591 aaPredicted RBP9.87□□□□□ -0.83
CCNT1-201ENST00000261900 IFNL2Q8IZJ0 200 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 UBA5Q9GZZ9 404 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 CETN1Q12798 172 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 CEP57L1Q8IYX8 460 aa9.87□□□□□ -0.83
CCNT1-201ENST00000261900 TTC16Q8NEE8 873 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms