RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 MXRA7P84157 204 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 NACAP1Q9BZK3 213 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 SFPQP23246 707 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP6-201ENST00000250066 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
USP6-201ENST00000250066 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
USP6-201ENST00000250066 TRAK1Q9UPV9 953 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 TTC36A6NLP5 189 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 FKBP15Q5T1M5 1219 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 NUTM2DQ5VT03 806 aaPredicted RBP10.08□□□□□ -0.8
USP6-201ENST00000250066 STK3Q13188 491 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 A0A1W2PRG0 241 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 LARP1BQ659C4 914 aaKnown RBP10.08□□□□□ -0.8
USP6-201ENST00000250066 VGFO15240 615 aaPredicted RBP10.08□□□□□ -0.8
USP6-201ENST00000250066 SLU7O95391 586 aaKnown RBP10.08□□□□□ -0.8
USP6-201ENST00000250066 PPP1R9BQ96SB3 815 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 ANAPC4Q9UJX5 808 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 PPP4R3AQ6IN85 833 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 NUP133Q8WUM0 1156 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 MKRN1Q9UHC7 482 aaKnown RBP10.08□□□□□ -0.8
USP6-201ENST00000250066 ESPNB1AK53 854 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 AAMPQ13685 434 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 SPATA32Q96LK8 384 aa10.08□□□□□ -0.8
USP6-201ENST00000250066 USO1O60763 962 aaKnown RBP10.07□□□□□ -0.8
USP6-201ENST00000250066 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP6-201ENST00000250066 DNA2P51530 1060 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 NUP62CLQ9H1M0 184 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 PANK3Q9H999 370 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 URI1O94763 535 aaPredicted RBP10.07□□□□□ -0.8
USP6-201ENST00000250066 TPD52P55327 224 aaPredicted RBP10.07□□□□□ -0.8
USP6-201ENST00000250066 MPHOSPH9Q99550 1183 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP6-201ENST00000250066 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
USP6-201ENST00000250066 PSME1Q06323 249 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 CEP112Q8N8E3 955 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 EVC2Q86UK5 1308 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 DYNC1I1O14576 645 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 KIF6Q6ZMV9 814 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 RPUSD2Q8IZ73 545 aaKnown RBP10.07□□□□□ -0.8
USP6-201ENST00000250066 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 FAM184BQ9ULE4 1060 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 TNIP1Q15025 636 aa10.07□□□□□ -0.8
USP6-201ENST00000250066 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
USP6-201ENST00000250066 LMAN1P49257 510 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 CEP135Q66GS9 1140 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 CPSF2Q9P2I0 782 aaKnown RBP10.06□□□□□ -0.8
USP6-201ENST00000250066 CEP131Q9UPN4 1083 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 APAF1O14727 1248 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 TTC16Q8NEE8 873 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 ANKS4BQ8N8V4 417 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 IL27Q8NEV9 243 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 MIPOL1Q8TD10 442 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
USP6-201ENST00000250066 SCLT1Q96NL6 688 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 CNNM1Q9NRU3 951 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 TSG101Q99816 390 aa10.06□□□□□ -0.8
USP6-201ENST00000250066 DIAPH1O60610 1272 aaKnown RBP10.05□□□□□ -0.8
USP6-201ENST00000250066 CWC25Q9NXE8 425 aaPredicted RBP10.05□□□□□ -0.8
USP6-201ENST00000250066 SEPT10Q9P0V9 454 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 RBM5P52756 815 aaKnown RBP eCLIP10.05□□□□□ -0.8
USP6-201ENST00000250066 MAATS1Q7Z4T9 603 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 DDX12PQ92771 950 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 ACTN2P35609 894 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 IQCGQ9H095 443 aaKnown RBP10.05□□□□□ -0.8
USP6-201ENST00000250066 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 PRPF4BQ13523 1007 aaKnown RBP10.05□□□□□ -0.8
USP6-201ENST00000250066 RAPGEF4Q8WZA2 1011 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
USP6-201ENST00000250066 POTEB2H3BUK9 544 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 GNAI1P63096 354 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 SMC6Q96SB8 1091 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
USP6-201ENST00000250066 MAP3K11Q16584 847 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 SMC1BQ8NDV3 1235 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 PAIP2Q9BPZ3 127 aaKnown RBP10.04□□□□□ -0.8
USP6-201ENST00000250066 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 WASHC2CQ9Y4E1 1318 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 SETSIPP0DME0 302 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 ZBTB16Q05516 673 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 LRRC45Q96CN5 670 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 NSRP1Q9H0G5 558 aaKnown RBP10.04□□□□□ -0.8
USP6-201ENST00000250066 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 GBP7Q8N8V2 638 aaPredicted RBP10.04□□□□□ -0.8
USP6-201ENST00000250066 ZFP91Q96JP5 570 aaPredicted RBP10.04□□□□□ -0.8
USP6-201ENST00000250066 ALS2CR12Q96Q35 445 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 KIF4AO95239 1232 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 KLHL10Q6JEL2 608 aa10.04□□□□□ -0.8
USP6-201ENST00000250066 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
USP6-201ENST00000250066 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
USP6-201ENST00000250066 USP5P45974 858 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 CETN1Q12798 172 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms