RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 XPCQ01831 940 aaPredicted RBP23.51■■□□□ 1.35
SOX4-201ENST00000244745 TCEAL9Q9UHQ7 104 aa23.5■■□□□ 1.35
SOX4-201ENST00000244745 MX1P20591 662 aa23.5■■□□□ 1.35
SOX4-201ENST00000244745 KIF6Q6ZMV9 814 aa23.5■■□□□ 1.35
SOX4-201ENST00000244745 CAMK4Q16566 473 aa23.49■■□□□ 1.35
SOX4-201ENST00000244745 FILIP1LQ4L180 1135 aa23.49■■□□□ 1.35
SOX4-201ENST00000244745 SMARCE1Q969G3 411 aa23.48■■□□□ 1.35
SOX4-201ENST00000244745 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
SOX4-201ENST00000244745 STK11IPQ8N1F8 1099 aa23.48■■□□□ 1.35
SOX4-201ENST00000244745 BTBD11A6QL63 1104 aa23.48■■□□□ 1.35
SOX4-201ENST00000244745 CCDC83Q8IWF9 413 aa23.47■■□□□ 1.35
SOX4-201ENST00000244745 RDXP35241 583 aaKnown RBP23.47■■□□□ 1.35
SOX4-201ENST00000244745 UPF3BQ9BZI7 483 aaKnown RBP23.47■■□□□ 1.35
SOX4-201ENST00000244745 CDR1P51861 262 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 CNNM1Q9NRU3 951 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 SCAF11Q99590 1463 aaKnown RBP23.46■■□□□ 1.35
SOX4-201ENST00000244745 PTPRKQ15262 1439 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 TAF3Q5VWG9 929 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 RAPGEF3O95398 923 aa23.46■■□□□ 1.35
SOX4-201ENST00000244745 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
SOX4-201ENST00000244745 EPS15P42566 896 aa23.45■■□□□ 1.35
SOX4-201ENST00000244745 TATP17735 454 aaPredicted RBP23.45■■□□□ 1.34
SOX4-201ENST00000244745 JMYQ8N9B5 988 aa23.45■■□□□ 1.34
SOX4-201ENST00000244745 NUDT16Q96DE0 195 aaKnown RBP23.45■■□□□ 1.34
SOX4-201ENST00000244745 TBC1D32Q96NH3 1257 aa23.45■■□□□ 1.34
SOX4-201ENST00000244745 FAM177A1Q8N128 213 aaPredicted RBP23.44■■□□□ 1.34
SOX4-201ENST00000244745 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.44■■□□□ 1.34
SOX4-201ENST00000244745 ZMYND15Q9H091 742 aa23.44■■□□□ 1.34
SOX4-201ENST00000244745 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
SOX4-201ENST00000244745 MAP3K11Q16584 847 aa23.44■■□□□ 1.34
SOX4-201ENST00000244745 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
SOX4-201ENST00000244745 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
SOX4-201ENST00000244745 DDX11Q96FC9 970 aa23.43■■□□□ 1.34
SOX4-201ENST00000244745 CFAP45Q9UL16 551 aa23.43■■□□□ 1.34
SOX4-201ENST00000244745 MAPK8IP2Q13387 824 aaPredicted RBP23.43■■□□□ 1.34
SOX4-201ENST00000244745 TBC1D9Q6ZT07 1266 aa23.43■■□□□ 1.34
SOX4-201ENST00000244745 WAPLQ7Z5K2 1190 aa23.43■■□□□ 1.34
SOX4-201ENST00000244745 MAGEC2Q9UBF1 373 aaPredicted RBP23.43■■□□□ 1.34
SOX4-201ENST00000244745 PRPF40BQ6NWY9 871 aaKnown RBP23.43■■□□□ 1.34
SOX4-201ENST00000244745 SKIDA1Q1XH10 827 aa23.43■■□□□ 1.34
SOX4-201ENST00000244745 CABP4P57796 275 aa23.42■■□□□ 1.34
SOX4-201ENST00000244745 FKBP4Q02790 459 aaKnown RBP eCLIP23.42■■□□□ 1.34
SOX4-201ENST00000244745 FERMT3Q86UX7 667 aa23.42■■□□□ 1.34
SOX4-201ENST00000244745 CCDC183Q5T5S1 534 aa23.41■■□□□ 1.34
SOX4-201ENST00000244745 F6X3S4 739 aa23.41■■□□□ 1.34
SOX4-201ENST00000244745 FILIP1Q7Z7B0 1213 aa23.41■■□□□ 1.34
SOX4-201ENST00000244745 CCDC69A6NI79 296 aa23.41■■□□□ 1.34
SOX4-201ENST00000244745 AXDND1Q5T1B0 1012 aaPredicted RBP23.4■■□□□ 1.34
SOX4-201ENST00000244745 CEP57L1Q8IYX8 460 aa23.4■■□□□ 1.34
SOX4-201ENST00000244745 NME9Q86XW9 330 aa23.4■■□□□ 1.34
SOX4-201ENST00000244745 EMILIN1Q9Y6C2 1016 aa23.4■■□□□ 1.34
SOX4-201ENST00000244745 PPFIBP1Q86W92 1011 aa23.4■■□□□ 1.34
SOX4-201ENST00000244745 KIF1BPQ96EK5 621 aa23.4■■□□□ 1.34
SOX4-201ENST00000244745 CTDP1Q9Y5B0 961 aaPredicted RBP23.4■■□□□ 1.34
SOX4-201ENST00000244745 DDX54Q8TDD1 881 aaKnown RBP23.39■■□□□ 1.34
SOX4-201ENST00000244745 OFD1O75665 1012 aa23.39■■□□□ 1.34
SOX4-201ENST00000244745 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.34
SOX4-201ENST00000244745 CBFA2T2O43439 604 aa23.39■■□□□ 1.34
SOX4-201ENST00000244745 TXLNAP40222 546 aa23.39■■□□□ 1.34
SOX4-201ENST00000244745 DACH1Q9UI36 760 aa23.39■■□□□ 1.34
SOX4-201ENST00000244745 RAB11FIP3O75154 756 aa23.39■■□□□ 1.33
SOX4-201ENST00000244745 KRT32Q14532 448 aa23.39■■□□□ 1.33
SOX4-201ENST00000244745 SAMD1Q6SPF0 538 aaPredicted RBP23.39■■□□□ 1.33
SOX4-201ENST00000244745 DHX8Q14562 1220 aaKnown RBP23.38■■□□□ 1.33
SOX4-201ENST00000244745 CALRP27797 417 aaKnown RBP23.38■■□□□ 1.33
SOX4-201ENST00000244745 PRM3Q9NNZ6 103 aa23.38■■□□□ 1.33
SOX4-201ENST00000244745 RALGAPBQ86X10 1494 aa23.38■■□□□ 1.33
SOX4-201ENST00000244745 TRIM22Q8IYM9 498 aa23.37■■□□□ 1.33
SOX4-201ENST00000244745 NUP133Q8WUM0 1156 aa23.36■■□□□ 1.33
SOX4-201ENST00000244745 SLC26A8Q96RN1 970 aa23.36■■□□□ 1.33
SOX4-201ENST00000244745 TSPYL1Q9H0U9 437 aa23.36■■□□□ 1.33
SOX4-201ENST00000244745 RBM27Q9P2N5 1060 aaKnown RBP23.36■■□□□ 1.33
SOX4-201ENST00000244745 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
SOX4-201ENST00000244745 CCDC43Q96MW1 224 aaKnown RBP23.36■■□□□ 1.33
SOX4-201ENST00000244745 LARP6Q9BRS8 491 aaKnown RBP23.36■■□□□ 1.33
SOX4-201ENST00000244745 ZHX1Q9UKY1 873 aaPredicted RBP23.36■■□□□ 1.33
SOX4-201ENST00000244745 UGGT2Q9NYU1 1516 aa23.36■■□□□ 1.33
SOX4-201ENST00000244745 C8orf34Q49A92 452 aa23.35■■□□□ 1.33
SOX4-201ENST00000244745 BMP2KLQ5H9B9 411 aa23.35■■□□□ 1.33
SOX4-201ENST00000244745 SPG7Q9UQ90 795 aa23.35■■□□□ 1.33
SOX4-201ENST00000244745 CDK5RAP3Q96JB5 506 aa23.35■■□□□ 1.33
SOX4-201ENST00000244745 CCDC57Q2TAC2 916 aa23.35■■□□□ 1.33
SOX4-201ENST00000244745 LRRFIP2Q9Y608 721 aaKnown RBP23.35■■□□□ 1.33
SOX4-201ENST00000244745 GLRX3O76003 335 aaKnown RBP23.34■■□□□ 1.33
SOX4-201ENST00000244745 PIP4K2AP48426 406 aaPredicted RBP23.34■■□□□ 1.33
SOX4-201ENST00000244745 BAG4O95429 457 aaKnown RBP23.34■■□□□ 1.33
SOX4-201ENST00000244745 CCDC61Q9Y6R9 512 aa23.34■■□□□ 1.33
SOX4-201ENST00000244745 NOS1P29475 1434 aa23.34■■□□□ 1.33
SOX4-201ENST00000244745 GDPD2Q9HCC8 539 aa23.34■■□□□ 1.33
SOX4-201ENST00000244745 SLC3A2P08195 630 aaKnown RBP23.34■■□□□ 1.33
SOX4-201ENST00000244745 STRN4Q9NRL3 753 aa23.33■■□□□ 1.33
SOX4-201ENST00000244745 SPINK5Q9NQ38 1064 aaPredicted RBP23.33■■□□□ 1.33
SOX4-201ENST00000244745 USP25Q9UHP3 1055 aa23.33■■□□□ 1.33
SOX4-201ENST00000244745 EIF3JO75822 258 aaKnown RBP23.33■■□□□ 1.32
SOX4-201ENST00000244745 CT47A1Q5JQC4 288 aaPredicted RBP23.33■■□□□ 1.32
SOX4-201ENST00000244745 CLCN1P35523 988 aa23.33■■□□□ 1.32
SOX4-201ENST00000244745 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
SOX4-201ENST00000244745 ERLIN1O75477 346 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms