RNA–Protein interactions for RNA: ENSMUST00000039562.7

Trim13-201, Transcript of E3 ubiquitin-protein ligase TRIM13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim13, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13-201ENSMUST00000039562 Neurod2Q62414 383 aa11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 Rab11fip3Q8CHD8 1047 aa11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 Emilin2Q8K482 1074 aa11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 Ddx54Q8K4L0 874 aaKnown RBP11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 HypkQ9CR41 129 aa11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 Swt1Q9DBQ9 907 aa11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 Nwd2Q6P5U7 1742 aa11.8□□□□□ -0.52
Trim13-201ENSMUST00000039562 Gm10471E9Q1C7 252 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Gsdma3Q5Y4Y6 464 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Atxn3Q9CVD2 355 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Tns2Q8CGB6 1400 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 TmpoQ61033 693 aaKnown RBP11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Amotl1Q9D4H4 968 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Ttc41Q692V3 1318 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Kank1E9Q238 1360 aa11.79□□□□□ -0.52
Trim13-201ENSMUST00000039562 Plekhd1B2RPU2 505 aa11.78□□□□□ -0.52
Trim13-201ENSMUST00000039562 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.77□□□□□ -0.53
Trim13-201ENSMUST00000039562 Zranb3Q6NZP1 1069 aa11.77□□□□□ -0.53
Trim13-201ENSMUST00000039562 Sugp2Q8CH09 1067 aa11.77□□□□□ -0.53
Trim13-201ENSMUST00000039562 Ttc21aQ8C0S4 1314 aa11.77□□□□□ -0.53
Trim13-201ENSMUST00000039562 Ankrd50F7BE84 1390 aa11.77□□□□□ -0.53
Trim13-201ENSMUST00000039562 Shank3Q4ACU6 1730 aa11.76□□□□□ -0.53
Trim13-201ENSMUST00000039562 Plekhh1Q80TI1 1356 aa11.76□□□□□ -0.53
Trim13-201ENSMUST00000039562 Sgsm1Q8BPQ7 1093 aa11.76□□□□□ -0.53
Trim13-201ENSMUST00000039562 Ubap1lG3UW59 384 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Anks4bQ8K3X6 423 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 OscarQ8VBT3 265 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Ltbp1Q8CG19 1712 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Abcc12Q80WJ6 1366 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Aox2Q5SGK3 1345 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 L3mbtl2P59178 703 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Aplp2Q06335 707 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Gas2l2Q5SSG4 860 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Zeb2Q9R0G7 1215 aa11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Tjp1P39447 1745 aaKnown RBP11.75□□□□□ -0.53
Trim13-201ENSMUST00000039562 Erbb3Q61526 1339 aa11.74□□□□□ -0.53
Trim13-201ENSMUST00000039562 Pak3Q61036 559 aa11.74□□□□□ -0.53
Trim13-201ENSMUST00000039562 Zpr1Q62384 459 aa11.74□□□□□ -0.53
Trim13-201ENSMUST00000039562 Sos1Q62245 1319 aa11.73□□□□□ -0.53
Trim13-201ENSMUST00000039562 Eif5bQ05D44 1216 aaKnown RBP11.73□□□□□ -0.53
Trim13-201ENSMUST00000039562 ThemisQ8BGW0 636 aa11.73□□□□□ -0.53
Trim13-201ENSMUST00000039562 Snap23O09044 210 aa11.72□□□□□ -0.53
Trim13-201ENSMUST00000039562 BcorQ8CGN4 1759 aa11.72□□□□□ -0.53
Trim13-201ENSMUST00000039562 Abca3Q8R420 1704 aa11.72□□□□□ -0.53
Trim13-201ENSMUST00000039562 Rtf1A2AQ19 715 aaKnown RBP11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Gnai1B2RSH2 354 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Cc2d1aQ8K1A6 943 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Cdc37l1Q9CZP7 335 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Gnai3Q9DC51 354 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Mst1rQ62190 1378 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Tiam2Q6ZPF3 1715 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Adamtsl1Q8BLI0 1745 aa11.71□□□□□ -0.53
Trim13-201ENSMUST00000039562 Kcna3P16390 528 aa11.71□□□□□ -0.54
Trim13-201ENSMUST00000039562 4930572O03RikQ8C5Y0 211 aa11.71□□□□□ -0.54
Trim13-201ENSMUST00000039562 Psrc1Q9D0P7 329 aa11.71□□□□□ -0.54
Trim13-201ENSMUST00000039562 Rbm25B2RY56 838 aaKnown RBP11.7□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ksr2Q3UVC0 959 aa11.7□□□□□ -0.54
Trim13-201ENSMUST00000039562 Fam50bQ9WTJ8 334 aa11.7□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ly75Q60767 1723 aa11.69□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ccdc129Q14B48 1034 aa11.69□□□□□ -0.54
Trim13-201ENSMUST00000039562 Upf2A2AT37 1269 aaKnown RBP11.68□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ccar1Q8CH18 1146 aaKnown RBP11.68□□□□□ -0.54
Trim13-201ENSMUST00000039562 Pdzd9Q9D9M4 266 aa11.68□□□□□ -0.54
Trim13-201ENSMUST00000039562 Phkg2Q9DB30 406 aa11.68□□□□□ -0.54
Trim13-201ENSMUST00000039562 Kcnh4A2A5F7 1018 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 InhbeO08717 350 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 CastP51125 788 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Yy1Q00899 414 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ggnbp2Q5SV77 696 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Pm20d1Q8C165 503 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Klhdc4Q921I2 584 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ssfa2Q922B9 1252 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Tnnt3Q9QZ47 272 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 NudcO35685 332 aaKnown RBP11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Prim1P20664 417 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Nkx2-3P97334 362 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Speer4bQ9D9F7 267 aa11.67□□□□□ -0.54
Trim13-201ENSMUST00000039562 Igsf1Q7TQA1 1317 aa11.66□□□□□ -0.54
Trim13-201ENSMUST00000039562 Eif3bQ8JZQ9 803 aaKnown RBP11.66□□□□□ -0.54
Trim13-201ENSMUST00000039562 Msh6P54276 1358 aaKnown RBP11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 Gm21680A0A0G2JGR8 267 aa11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 Sf3b2Q3UJB0 878 aaKnown RBP11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 Kiaa0319Q5SZV5 1081 aa11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 Larp1Q6ZQ58 1072 aaKnown RBP11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 Asic4Q7TNS7 539 aa11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 Ginm1Q91WR6 327 aa11.65□□□□□ -0.54
Trim13-201ENSMUST00000039562 U2surpQ6NV83 1029 aaKnown RBP11.64□□□□□ -0.55
Trim13-201ENSMUST00000039562 Chmp7Q8R1T1 451 aa11.64□□□□□ -0.55
Trim13-201ENSMUST00000039562 Usp16Q99LG0 825 aa11.64□□□□□ -0.55
Trim13-201ENSMUST00000039562 Ccdc171E9Q1U1 1324 aa11.64□□□□□ -0.55
Trim13-201ENSMUST00000039562 Kndc1Q0KK55 1742 aa11.64□□□□□ -0.55
Trim13-201ENSMUST00000039562 Sik1Q60670 779 aa11.63□□□□□ -0.55
Trim13-201ENSMUST00000039562 Foxp4Q9DBY0 795 aaKnown RBP11.63□□□□□ -0.55
Trim13-201ENSMUST00000039562 Elp1Q7TT37 1333 aaKnown RBP11.63□□□□□ -0.55
Trim13-201ENSMUST00000039562 Crb1Q8VHS2 1405 aa11.63□□□□□ -0.55
Trim13-201ENSMUST00000039562 PsdQ5DTT2 1024 aa11.62□□□□□ -0.55
Trim13-201ENSMUST00000039562 Ankrd23Q812A3 306 aa11.62□□□□□ -0.55
Trim13-201ENSMUST00000039562 Nav1Q8CH77 1875 aa11.62□□□□□ -0.55
Trim13-201ENSMUST00000039562 Nsd3Q6P2L6 1439 aa11.62□□□□□ -0.55
Trim13-201ENSMUST00000039562 Gm21663A0A0G2JE01 267 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms