RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 ADGRG1Q9Y653 693 aa18.85■□□□□ 0.61
CCDC28A-203ENST00000617445 EPN1Q9Y6I3 576 aaPredicted RBP18.85■□□□□ 0.61
CCDC28A-203ENST00000617445 A6NCN8 305 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 APOC4-APOC2K7ER74 178 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 KMOO15229 486 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 APOC2P02655 101 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 THRAP10827 490 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 BPIP17213 487 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 CD68P34810 354 aaPredicted RBP18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 ETV5P41161 510 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 WNT3AP56704 352 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 MPP3Q13368 585 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 NKAIN2Q5VXU1 208 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 ALS2CLQ60I27 953 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 KDELC1Q6UW63 502 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 B4GALNT4Q76KP1 1039 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 ADGRG6Q86SQ4 1221 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 ZC3H18Q86VM9 953 aaKnown RBP18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 UBP1Q9NZI7 540 aa18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 PCYT1BQ9Y5K3 369 aaPredicted RBP18.84■□□□□ 0.61
CCDC28A-203ENST00000617445 TRBV23OR9-2A0A075B6M9 112 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 BTNL10A8MVZ5 291 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 C9orf172C9J069 976 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 PPFIA2O75334 1257 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 NDUFA10O95299 355 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 EML2O95834 649 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 NFKB1P19838 968 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 HLA-DPA1P20036 260 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 FECHP22830 423 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 CFHR1Q03591 330 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 ADCY2Q08462 1091 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 LRRTM4Q86VH4 590 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 DTX1Q86Y01 620 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 ZNF567Q8N184 647 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 BRSK1Q8TDC3 778 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 TIMM29Q9BSF4 260 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 ASPSCR1Q9BZE9 553 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 GOLPH3Q9H4A6 298 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 UCK1Q9HA47 277 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 CPNE7Q9UBL6 633 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 PCDHA3Q9Y5H8 950 aa18.83■□□□□ 0.6
CCDC28A-203ENST00000617445 ATMQ13315 3056 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 HELZ2Q9BYK8 2649 aaKnown RBP18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 B4E171 279 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 SNX2O60749 519 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 KCNJ13O60928 360 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 ZNF189O75820 626 aaPredicted RBP18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 CDK14O94921 469 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 SLC4A1P02730 911 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 FGF3P11487 239 aaPredicted RBP18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 XRCC1P18887 633 aaPredicted RBP18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 CSF2RBP32927 897 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 CTNNA1P35221 906 aaKnown RBP18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 CETN2P41208 172 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 TSPAN7P41732 249 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 ZNF75DP51815 510 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 LLGL1Q15334 1064 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 SIRPB2Q5JXA9 342 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 PCSK4Q6UW60 755 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 XKR5Q6UX68 686 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 RCBTB1Q8NDN9 531 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 TTC9Q92623 222 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 DDA1Q9BW61 102 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 ZMYND15Q9H091 742 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 KLC4Q9NSK0 619 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 FOXJ2Q9P0K8 574 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 SPO11Q9Y5K1 396 aa18.82■□□□□ 0.6
CCDC28A-203ENST00000617445 PIEZO2Q9H5I5 2752 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 CCDC66A2RUB6 948 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 LILRA5A6NI73 299 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 STMND1H3BQB6 276 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 AURKAO14965 403 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 ANXA9O76027 345 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 CCL4P13236 92 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 ZNF7P17097 686 aaPredicted RBP18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 VCLP18206 1134 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 PTPN7P35236 360 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 MARCKSL1P49006 195 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 PPM1FP49593 454 aaPredicted RBP18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 RAB15P59190 212 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 NFATC2Q13469 925 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 SLC1A5Q15758 541 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 INSCQ1MX18 579 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 MANEAQ5SRI9 462 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 FAM182AQ5T1J6 154 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 CCDC181Q5TID7 509 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 ITPRIPL1Q6GPH6 555 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 WASH2PQ6VEQ5 465 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 ZSCAN1Q8NBB4 408 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 KRT35Q92764 455 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 MRGPRX2Q96LB1 330 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 ZCCHC2Q9C0B9 1178 aaKnown RBP18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 WASH6PQ9NQA3 447 aa18.81■□□□□ 0.6
CCDC28A-203ENST00000617445 CFAP46Q8IYW2 2715 aa18.8■□□□□ 0.6
CCDC28A-203ENST00000617445 H7C0C1 242 aa18.8■□□□□ 0.6
CCDC28A-203ENST00000617445 AGRPO00253 132 aa18.8■□□□□ 0.6
CCDC28A-203ENST00000617445 EFSO43281 561 aa18.8■□□□□ 0.6
CCDC28A-203ENST00000617445 ATP5OP48047 213 aa18.8■□□□□ 0.6
CCDC28A-203ENST00000617445 GEMP55040 296 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms