RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 NVLO15381 856 aaKnown RBP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KCNN4O15554 427 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KCNJ13O60928 360 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 STK10O94804 968 aaKnown RBP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 CDK14O94921 469 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 EML2O95834 649 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 AGTP01019 485 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 ACP5P13686 325 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 F3P13726 295 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 SLC2A4P14672 509 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 ADRA1AP35348 466 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 UCNP55089 124 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 GPLD1P80108 840 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM115Q12893 351 aaPredicted RBP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 TRA2AQ13595 282 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 PRPSAP1Q14558 356 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KIR2DS5Q14953 304 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 ATP13A5Q4VNC0 1218 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF648Q5T619 568 aaPredicted RBP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 BROXQ5VW32 411 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 AADACL2Q6P093 401 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KLHDC8BQ8IXV7 354 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 AVL9Q8NBF6 648 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 SPC24Q8NBT2 197 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 OR4D9Q8NGE8 314 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 SLC37A2Q8TED4 501 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KCNE4Q8WWG9 221 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 HES6Q96HZ4 224 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 C19orf43Q9BQ61 176 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 GORASP1Q9BQQ3 440 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 FSD1LQ9BXM9 530 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 SEMA6CQ9H3T2 930 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 RDH14Q9HBH5 336 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 BPIFA1Q9NP55 256 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KCNK4Q9NYG8 393 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 PDP2Q9P2J9 529 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 TRIM10Q9UDY6 481 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 TMPRSS11EQ9UL52 423 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 PKP3Q9Y446 797 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 LOXL2Q9Y4K0 774 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 ANKRD36A6QL64 1941 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 BPTFQ12830 3046 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 IGHV5-10-1A0A0J9YXX1 117 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 A0A0U1RQJ8 604 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 GOLGA6L9A6NEM1 432 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 PRR19A6NJB7 356 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 GOLGA6L6A8MZA4 724 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 F5H423 210 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 DDX3YO15523 660 aaKnown RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 KLK10O43240 276 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SLC4A1P02730 911 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 JMJD7P0C870 316 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF7P17097 686 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 XRCC1P18887 633 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SLC5A2P31639 672 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SPAM1P38567 509 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 LIMK2P53671 638 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 GSDMDP57764 484 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 HHEXQ03014 270 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 CFHR1Q03591 330 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 KLF1Q13351 362 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 TAF1AQ15573 450 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 PHF19Q5T6S3 580 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM71Q6P5X7 295 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 ABRAXAS1Q6UWZ7 409 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 WASH2PQ6VEQ5 465 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 GLT6D1Q7Z4J2 308 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SLC9B2Q86UD5 537 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 LRRTM4Q86VH4 590 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF547Q8IVP9 402 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 BLOC1S5Q8TDH9 187 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SNRNP27Q8WVK2 155 aaKnown RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 CRELD1Q96HD1 420 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 NAF1Q96HR8 494 aaKnown RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SPATA13Q96N96 652 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SLC38A3Q99624 504 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 NUDT22Q9BRQ3 303 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 TIMM29Q9BSF4 260 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 DESI2Q9BSY9 194 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 STN1Q9H668 368 aaKnown RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 ARNT2Q9HBZ2 717 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 ARFGAP3Q9NP61 516 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 WASH6PQ9NQA3 447 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 KLC4Q9NSK0 619 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 SLC23A2Q9UGH3 650 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 KCNK6Q9Y257 313 aa10.38□□□□□ -0.75
CCDC9-203ENST00000596938 DNMT3AQ9Y6K1 912 aaPredicted RBP10.38□□□□□ -0.75
CCDC9-203ENST00000596938 LRP4O75096 1905 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 GLYATL1P3A0A0U1RQE8 302 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 C2orf81A6NN90 581 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 GAPDHSO14556 408 aaPredicted RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 STX7O15400 261 aaKnown RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A9O60656 530 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 SNX2O60749 519 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 MTX2O75431 263 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms