RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 IDO1P14902 403 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CD1DP15813 335 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 PCSK1P29120 753 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CCR1P32246 355 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CD97P48960 835 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 FOXA1P55317 472 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 NAA20P61599 178 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 YBX1P67809 324 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 CYBRD1Q53TN4 286 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 AARS2Q5JTZ9 985 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 KCTD8Q6ZWB6 473 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 BEND5Q7L4P6 421 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 SPRED2Q7Z698 418 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 TBC1D21Q8IYX1 336 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 DCP1BQ8IZD4 617 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 RTL3Q8N8U3 475 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 TBC1D15Q8TC07 691 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 TMEM125Q96AQ2 219 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 IMP4Q96G21 291 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 INTS10Q9NVR2 710 aaKnown RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 POLR3BQ9NW08 1133 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 ANAPC2Q9UJX6 822 aa11.4□□□□□ -0.58
DDB1-224ENST00000545894 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
DDB1-224ENST00000545894 COL4A4P53420 1690 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 TCRBV5S2A0A599 114 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 TRIM64BA6NI03 449 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 NOL3O60936 208 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 SIX3O95343 332 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 CA3P07451 260 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 UMPSP11172 480 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 MTHFD1P11586 935 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 FDXRP22570 491 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 MAGEA8P43361 318 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 GSK3BP49841 420 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ARSDP51689 593 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 NFYCQ13952 458 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 FGD3Q5JSP0 725 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 PTRH1Q86Y79 214 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 CPNE9Q8IYJ1 553 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 RYBPQ8N488 228 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 PAPD5Q8NDF8 572 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 MAGEE2Q8TD90 523 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 TSPEARQ8WU66 669 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 BCL7CQ8WUZ0 217 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 COX4I2Q96KJ9 171 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 CNDP2Q96KP4 475 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 KCTD14Q9BQ13 255 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 TUBA1CQ9BQE3 449 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 TUBB1Q9H4B7 451 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ALG2Q9H553 416 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 SLC52A3Q9NQ40 469 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 OSER1Q9NX31 292 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 MARCH5Q9NX47 278 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 TMEM9Q9P0T7 183 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 MARCH4Q9P2E8 410 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 POLG2Q9UHN1 485 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 CRYL1Q9Y2S2 319 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ZNF711Q9Y462 761 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 A0A1W2PP18 115 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 MROH6A6NGR9 719 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 CCL22O00626 93 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ATP6V1G1O75348 118 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 VPS4BO75351 444 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 B3GAT3O94766 335 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 LDLRP01130 860 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 SLC4A1P02730 911 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 LINC00032P0C843 101 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ZNF12P17014 697 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 BDNFP23560 247 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 CD86P42081 329 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 HLCSP50747 726 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 C21orf59P57076 290 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 LIPEQ05469 1076 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ITKQ08881 620 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ILF2Q12905 390 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 PFKFB4Q16877 469 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 AASDHQ4L235 1098 aaPredicted RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 SLC44A4Q53GD3 710 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 CCNYL2Q5T2Q4 361 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 ARTNQ5T4W7 220 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 USP51Q70EK9 711 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 IFNEQ86WN2 208 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 DDHD1Q8NEL9 900 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 PNPT1Q8TCS8 783 aaKnown RBP11.39□□□□□ -0.59
DDB1-224ENST00000545894 SH3RF2Q8TEC5 729 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 KCNA7Q96RP8 456 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 TRIM8Q9BZR9 551 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 NKX2-4Q9H2Z4 354 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 MPP6Q9NZW5 540 aa11.39□□□□□ -0.59
DDB1-224ENST00000545894 LAMA2P24043 3122 aaKnown RBP11.38□□□□□ -0.59
DDB1-224ENST00000545894 OR51F1A6NGY5 319 aa11.38□□□□□ -0.59
DDB1-224ENST00000545894 LRRC14BA6NHZ5 514 aa11.38□□□□□ -0.59
DDB1-224ENST00000545894 E9PAM4 449 aa11.38□□□□□ -0.59
DDB1-224ENST00000545894 UBXN8O00124 270 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms