RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CAPN3P20807 821 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 ITGB8P26012 769 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 DCAF7P61962 342 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 TRAF2Q12933 501 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 OLIG2Q13516 323 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 SIM2Q14190 667 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 SLC45A4Q5BKX6 768 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 EFHC1Q5JVL4 640 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 SNX30Q5VWJ9 437 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 TTI2Q6NXR4 508 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 ANKRD54Q6NXT1 300 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 C8orf82Q6P1X6 216 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 CYP20A1Q6UW02 462 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 B3GNT6Q6ZMB0 384 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 NEK10Q6ZWH5 1172 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 MTSS1LQ765P7 747 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 CCDC13Q8IYE1 715 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 ADSSL1Q8N142 457 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 NGEFQ8N5V2 710 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 NEK9Q8TD19 979 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 TMED6Q8WW62 240 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 MMABQ96EY8 250 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 SLC41A2Q96JW4 573 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 WDFY2Q96P53 400 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 MAP7D2Q96T17 732 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 FAM110AQ9BQ89 295 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 TMEM47Q9BQJ4 181 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 MMTAG2Q9BU76 263 aaKnown RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 STRA6Q9BX79 667 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 POLR1BQ9H9Y6 1135 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 MKKSQ9NPJ1 570 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 EHD2Q9NZN4 543 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 CNOT8Q9UFF9 292 aaKnown RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 KCNG2Q9UJ96 466 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 ERVK-11Q9UQG0 969 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 STON1Q9Y6Q2 735 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 CHD4Q14839 1912 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 PEAK1Q9H792 1746 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 CRYBG1Q9Y4K1 1723 aa3.69□□□□□ -1.82
HDAC2-208ENST00000520746 EDC4Q6P2E9 1401 aaKnown RBP3.69□□□□□ -1.82
HDAC2-208ENST00000520746 A0A1W2PRG0 241 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 SMTNL1A8MU46 457 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 AKR1B15C9JRZ8 316 aaPredicted RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 H0YIN7 160 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 WNT9BO14905 357 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 SOCS5O75159 536 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 NKX2-2O95096 273 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 DDX58O95786 925 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 EIF2S1P05198 315 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 CYC1P08574 325 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 ZNF182P17025 639 aaPredicted RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 HNRNPH1P31943 449 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 STX2P32856 288 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 EIF2S3P41091 472 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 RXRGP48443 463 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 PDLIM4P50479 330 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 F2RL1P55085 397 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 DDR1Q08345 913 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 CSTF3Q12996 717 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 TRAF3Q13114 568 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 MAMLD1Q13495 774 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 ITPK1Q13572 414 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 MAPRE1Q15691 268 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 HLFQ16534 295 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 EIF2S3LQ2VIR3 472 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 USP41Q3LFD5 358 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 C1orf141Q5JVX7 400 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 C6orf141Q5SZD1 244 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 GPATCH4Q5T3I0 446 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.68□□□□□ -1.822e-9■■■■■ 100.8
HDAC2-208ENST00000520746 C4orf50Q6ZRC1 276 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 WDR63Q8IWG1 891 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 DSELQ8IZU8 1212 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 CLIP4Q8N3C7 705 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 SPATA6LQ8N4H0 392 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 ARHGEF2Q92974 986 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 ZNF622Q969S3 477 aaKnown RBP eCLIP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 KXD1Q9BQD3 176 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 C1QTNF5Q9BXJ0 243 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 IFIH1Q9BYX4 1025 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 HINT3Q9NQE9 182 aaKnown RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 CNGB3Q9NQW8 809 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 OCIAD1Q9NX40 245 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 ABI3Q9P2A4 366 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 SLC9A2Q9UBY0 812 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 CORO1CQ9ULV4 474 aaPredicted RBP3.68□□□□□ -1.82
HDAC2-208ENST00000520746 AKAP12Q02952 1782 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 TOPAZ1Q8N9V7 1692 aa3.68□□□□□ -1.82
HDAC2-208ENST00000520746 SBF2Q86WG5 1849 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 ARHGEF28Q8N1W1 1705 aaKnown RBP3.67□□□□□ -1.82
HDAC2-208ENST00000520746 TONSLQ96HA7 1378 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 RGPD3A6NKT7 1758 aaPredicted RBP3.67□□□□□ -1.82
HDAC2-208ENST00000520746 RGPD4Q7Z3J3 1758 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 ABCC6O95255 1503 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 IGLV5-52A0A0A0MRZ9 124 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 A0A1W2PQF6 199 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 GLTPD2A6NH11 291 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 BTBD18B2RXH4 712 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 MLYCDO95822 493 aa3.67□□□□□ -1.82
HDAC2-208ENST00000520746 SCGB1D1O95968 90 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms