RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CR2P20023 1033 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 SLC26A3P40879 764 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 CLCN5P51795 746 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 EPHA5P54756 1037 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 SLC7A9P82251 487 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 IL23RQ5VWK5 629 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 TXNDC8Q6A555 127 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 C8orf82Q6P1X6 216 aaPredicted RBP18.19■□□□□ 0.5
SDC2-202ENST00000518385 KDELC2Q7Z4H8 507 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 RBM23Q86U06 439 aaKnown RBP18.19■□□□□ 0.5
SDC2-202ENST00000518385 CAMK1DQ8IU85 385 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 GALNT4Q8N4A0 578 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 TSPAN17Q96FV3 270 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 HOPXQ9BPY8 73 aaPredicted RBP18.19■□□□□ 0.5
SDC2-202ENST00000518385 OSBPL6Q9BZF3 934 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 COQ10BQ9H8M1 238 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 PALMDQ9NP74 551 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 CACNA2D2Q9NY47 1150 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 TMEM181Q9P2C4 612 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 SLC2A6Q9UGQ3 507 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 RNF11Q9Y3C5 154 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 CXorf51AA0A1B0GTR3 108 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 EPOPA6NHQ4 379 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 TK2O00142 265 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 PSMD12O00232 456 aaPredicted RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 MUSKO15146 869 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 INSIG1O15503 277 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 IRF1P10914 325 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 GABRB3P28472 473 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 DPP6P42658 865 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 SLC1A2P43004 574 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 NME5P56597 212 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 FOXM1Q08050 763 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 IHHQ14623 411 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 INPP5AQ14642 412 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 DUSP6Q16828 381 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 COQ5Q5HYK3 327 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 MPP7Q5T2T1 576 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 RNF219Q5W0B1 726 aaPredicted RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 ZNF470Q6ECI4 717 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 CXorf57Q6NSI4 855 aaKnown RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 HTR3DQ70Z44 454 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 GPR141Q7Z602 305 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 AMIGO2Q86SJ2 522 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 CPXM2Q8N436 756 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 ARL14EPQ8N8R7 260 aaPredicted RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 PNPT1Q8TCS8 783 aaKnown RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 TMA16Q96EY4 203 aaKnown RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 VPS50Q96JG6 964 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 SLC45A3Q96JT2 553 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 TRIB3Q96RU7 358 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 TMEM79Q9BSE2 394 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 FAIMQ9NVQ4 179 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 DNMT3BQ9UBC3 853 aaKnown RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 FAF1Q9UNN5 650 aaPredicted RBP18.18■□□□□ 0.5
SDC2-202ENST00000518385 HCFC2Q9Y5Z7 792 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 OBSL1O75147 1896 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 DENND4CQ5VZ89 1909 aa18.18■□□□□ 0.5
SDC2-202ENST00000518385 FAM95CA0A1B0GW59 222 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 KANSL1LA0AUZ9 987 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 GOLGA8TH3BQL2 631 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 H3BSA7 217 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 UBDO15205 165 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 LDB2O43679 373 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 GREM1O60565 184 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 XYLBO75191 536 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 POU2F2P09086 479 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 MYF6P23409 242 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 PSMA3P25788 255 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 CYP4F8P98187 520 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 CTBP1Q13363 440 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 FASTKQ14296 549 aaKnown RBP18.17■□□□□ 0.5
SDC2-202ENST00000518385 FAM83EQ2M2I3 478 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 MAP7D1Q3KQU3 841 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 REP15Q6BDI9 236 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 ELMSAN1Q6PJG2 1045 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 ERMP1Q7Z2K6 904 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 CENPLQ8N0S6 344 aaPredicted RBP18.17■□□□□ 0.5
SDC2-202ENST00000518385 OR13J1Q8NGT2 312 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 GPR150Q8NGU9 434 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 OR2T34Q8NGX1 318 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 OR2T3Q8NH03 318 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 TSPEARQ8WU66 669 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 USP13Q92995 863 aaPredicted RBP18.17■□□□□ 0.5
SDC2-202ENST00000518385 ATXN7L3BQ96GX2 97 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 GPR78Q96P69 363 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 C9orf16Q9BUW7 83 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 MUC3BQ9H195 1237 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 CAB39LQ9H9S4 337 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 SCUBE2Q9NQ36 999 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 DDX18Q9NVP1 670 aaKnown RBP18.17■□□□□ 0.5
SDC2-202ENST00000518385 HCFC1R1Q9NWW0 138 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 XPR1Q9UBH6 696 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 MTF2Q9Y483 593 aaPredicted RBP18.17■□□□□ 0.5
SDC2-202ENST00000518385 A0A1W2PRU2 124 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 SOBPA7XYQ1 873 aa18.17■□□□□ 0.5
SDC2-202ENST00000518385 H0Y626 953 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms