RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ETNK1Q9HBU6 452 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 HOMER3Q9NSC5 361 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 TTC7AQ9ULT0 858 aaPredicted RBP12.75□□□□□ -0.37
COL5A1-206ENST00000465877 SNX12Q9UMY4 172 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 KCNK6Q9Y257 313 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
COL5A1-206ENST00000465877 ADAMTS20P59510 1910 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 CCL22O00626 93 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 CASC3O15234 703 aaKnown RBP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 TCEA3O75764 348 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 SRP72O76094 671 aaKnown RBP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 ECEL1O95672 775 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 MT-CO3P00414 261 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 JUPP14923 745 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 GLB1P16278 677 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 CA5AP35218 305 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 HADHAP40939 763 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 KCNJ1P48048 391 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 BASP1P80723 227 aaKnown RBP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 TARDBPQ13148 414 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 CAMK2BQ13554 666 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 GTF2H3Q13889 308 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 INSCQ1MX18 579 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 LDLRAP1Q5SW96 308 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 GPRC6AQ5T6X5 926 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 PPP1R21Q6ZMI0 780 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 LRRTM4Q86VH4 590 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 C17orf82Q86X59 251 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 TRAPPC5Q8IUR0 188 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 OR52K1Q8NGK4 314 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 WDR48Q8TAF3 677 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 DEPDC7Q96QD5 511 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 NAP1L3Q99457 506 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 ABCG4Q9H172 646 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 DRG1Q9Y295 367 aaKnown RBP12.74□□□□□ -0.37
COL5A1-206ENST00000465877 RNF215Q9Y6U7 377 aa12.74□□□□□ -0.37
COL5A1-206ENST00000465877 CFAP47Q6ZTR5 3102 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UNC13CQ8NB66 2214 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TMEM8BA6NDV4 472 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 D6RAR5 112 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CES2O00748 559 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A9O60656 530 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CSO75390 466 aaKnown RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CDK14O94921 469 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 EML2O95834 649 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 PROS1P07225 676 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 APRTP07741 180 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TPH1P17752 444 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A6P19224 532 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 ITGALP20701 1170 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A1P22309 533 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A4P22310 534 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 AKT1P31749 480 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 MC4RP32245 332 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 RPL22P35268 128 aaKnown RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A3P35503 534 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A5P35504 534 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 PDX1P52945 283 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TMPRSS15P98073 1019 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 XIAPP98170 497 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TMEM115Q12893 351 aaPredicted RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 NFATC2Q13469 925 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 SPIDRQ14159 915 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TTC27Q6P3X3 843 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 RBM44Q6ZP01 1051 aaKnown RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF438Q7Z4V0 828 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 SPRED1Q7Z699 444 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CCNJLQ8IV13 435 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF547Q8IVP9 402 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CACTIN-AS1Q8N1I8 211 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 DNAAF3Q8N9W5 541 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF398Q8TD17 642 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 SLC37A2Q8TED4 501 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 ZCCHC14Q8WYQ9 949 aaKnown RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TIMM29Q9BSF4 260 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 AP1M1Q9BXS5 423 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 OSGEPL1Q9H4B0 414 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 ASB8Q9H765 288 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 EIF2B3Q9NR50 452 aaKnown RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 NLE1Q9NVX2 485 aaPredicted RBP12.73□□□□□ -0.37
COL5A1-206ENST00000465877 TBC1D29Q9UFV1 150 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CRLS1Q9UJA2 301 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 PCDHB1Q9Y5F3 818 aa12.73□□□□□ -0.37
COL5A1-206ENST00000465877 CCDC78A2IDD5 438 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 A6NCN8 305 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 AGAP14A8MT82 685 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 H7C0S8 307 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 NTN3O00634 580 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-206ENST00000465877 KMOO15229 486 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 PHF2O75151 1096 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 GAS8O95995 478 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms