RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MCOLN2Q8IZK6 566 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 ADAMTS17Q8TE56 1095 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 NUDT9Q9BW91 350 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 GPR87Q9BY21 358 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 TRIM7Q9C029 511 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 RMI1Q9H9A7 625 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 ACSS2Q9NR19 701 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 TAB2Q9NYJ8 693 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 SEMA5BQ9P283 1151 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC23A2Q9UGH3 650 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 ZNF451Q9Y4E5 1061 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 F8P00451 2351 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 GRID2O43424 1007 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 CLDN7O95471 211 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 PRLP01236 227 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 PRF1P14222 555 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 FOLR1P15328 257 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 ZNF8P17098 575 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 PSMA2P25787 234 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 MIPP30301 263 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 PTGIRP43119 386 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 CAPZBP47756 277 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 RIPPLY3P57055 190 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 PPP1CAP62136 330 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 MAMLD1Q13495 774 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 KCNAB1Q14722 419 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 ZNF648Q5T619 568 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 CACHD1Q5VU97 1274 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 FAM92BQ6ZTR7 304 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 SYVN1Q86TM6 617 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 AVL9Q8NBF6 648 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 FDCSPQ8NFU4 85 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 SEC14L1Q92503 715 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 PHF12Q96QT6 1004 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 RANBP9Q96S59 729 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC29A3Q9BZD2 475 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 SLAMF7Q9NQ25 335 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 KLC4Q9NSK0 619 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 TAS2R14Q9NYV8 317 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 ATXN10Q9UBB4 475 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 SIK3Q9Y2K2 1263 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 POLEQ07864 2286 aa16.92■□□□□ 0.3
UBE2D4-209ENST00000454428 BRAFP15056 766 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 AMD1P17707 334 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 LPOP22079 712 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 AMPD1P23109 780 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 MMP13P45452 471 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 CERS6Q6ZMG9 384 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 ZNF517Q6ZMY9 492 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 PHYKPLQ8IUZ5 450 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 PNPLA2Q96AD5 504 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 SNRNP40Q96DI7 357 aaKnown RBP16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC41A2Q96JW4 573 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 AGPAT1Q99943 283 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 CARD9Q9H257 536 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 ARFGAP3Q9NP61 516 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 DTLQ9NZJ0 730 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC5A6Q9Y289 635 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 PCDHGB7Q9Y5F8 929 aa16.91■□□□□ 0.3
UBE2D4-209ENST00000454428 SETD2Q9BYW2 2564 aaPredicted RBP16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 IGHV5-51A0A0C4DH38 117 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 ATMINO43313 823 aaPredicted RBP16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 DPM1O60762 260 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 LRCH4O75427 683 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 VIPP01282 170 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 SPINT3P49223 89 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 TUBB3Q13509 450 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 MARC1Q5VT66 337 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 PSTKQ8IV42 348 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 RAVER1Q8IY67 606 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC40A1Q9NP59 571 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 NT5MQ9NPB1 228 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 MAP10Q9P2G4 905 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 EPHA6Q9UF33 1036 aa16.9■□□□□ 0.3
UBE2D4-209ENST00000454428 EEF1GP26641 437 aaKnown RBP16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 IL1R2P27930 398 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 GPR18Q14330 331 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 FAM69BQ5VUD6 431 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 ALG1LQ6GMV1 187 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 PLEKHA7Q6IQ23 1121 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 SLC38A9Q8NBW4 561 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 C5orf34Q96MH7 638 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 FCRL4Q96PJ5 515 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 LYSMD1Q96S90 227 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 TDRD1Q9BXT4 1180 aaKnown RBP16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 RAB33BQ9H082 229 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 OR2AG1Q9H205 316 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 OSGEPL1Q9H4B0 414 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 ASF1BQ9NVP2 202 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 RARRES3Q9UL19 164 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 CHKBQ9Y259 395 aa16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 FARSAQ9Y285 508 aaKnown RBP16.89■□□□□ 0.29
UBE2D4-209ENST00000454428 DIDO1Q9BTC0 2240 aaKnown RBP16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 TMEM191CA6NGB0 347 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 OR52A4PA6NMU1 304 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 CHUKO15111 745 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms