RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 CCL11P51671 97 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 PGDP52209 483 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 UBE2IP63279 158 aaKnown RBP17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 SEMA5AQ13591 1074 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 ASIC2Q16515 512 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 NADK2Q4G0N4 442 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 HENMT1Q5T8I9 393 aaKnown RBP17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 ALS2CLQ60I27 953 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 SLC25A23Q9BV35 468 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 TDRD1Q9BXT4 1180 aaKnown RBP17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 ACTL8Q9H568 366 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 PCDH18Q9HCL0 1135 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 LHX9Q9NQ69 397 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 ACSS2Q9NR19 701 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 TRIM10Q9UDY6 481 aa17.76■□□□□ 0.43
CHCHD3-203ENST00000448878 ENO4A6NNW6 628 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 TOX3O15405 576 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 SEMA7AO75326 666 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 CES1P23141 567 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 RPL10P27635 214 aaKnown RBP17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 CHAF1BQ13112 559 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 TXNRD3NBQ6F5E7 133 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 TIGD7Q6NT04 549 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 CYB5D1Q6P9G0 228 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 LRRC49Q8IUZ0 686 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 APLFQ8IW19 511 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 AOPEPQ8N6M6 819 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 CXorf40BQ96DE9 158 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 ZDHHC12Q96GR4 267 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 MLPHQ9BV36 600 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 HAUS4Q9H6D7 363 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 UCK1Q9HA47 277 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 PDE7BQ9NP56 450 aa17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 ZNF624Q9P2J8 865 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-203ENST00000448878 TNRC6AQ8NDV7 1962 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 LRRC53A6NM62 1247 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 MATN3O15232 486 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 PRLP01236 227 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 SLC4A1P02730 911 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 FGF5P12034 268 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 RPS18P62269 152 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 RPS15P62841 145 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 MMRN1Q13201 1228 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 IHHQ14623 411 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 EIF2S3LQ2VIR3 472 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 ZNF569Q5MCW4 686 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 FAM199XQ6PEV8 388 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 TTC30BQ8N4P2 665 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 SIDT2Q8NBJ9 832 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 LRRN4Q8WUT4 740 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 RSC1A1Q92681 617 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 TRIM11Q96F44 468 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 RUFY1Q96T51 708 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 SYT11Q9BT88 431 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 TRIM39Q9HCM9 518 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 RARRES3Q9UL19 164 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 PCDHGA6Q9Y5G7 932 aa17.74■□□□□ 0.43
CHCHD3-203ENST00000448878 ARGFXA6NJG6 315 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 C21orf140B9A014 251 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 KMOO15229 486 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 MFSD11O43934 449 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 TIAF1O95411 115 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 GZMAP12544 262 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 ARL4DP49703 201 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 CLCNKAP51800 687 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 MYL5Q02045 173 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 CPZQ66K79 652 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 ZNF571Q7Z3V5 609 aaPredicted RBP17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 RAVER1Q8IY67 606 aaKnown RBP17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 PRR7Q8TB68 274 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 SEC14L1Q92503 715 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 LUZP4Q9P127 313 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 SLC23A2Q9UGH3 650 aa17.73■□□□□ 0.43
CHCHD3-203ENST00000448878 ZNF106Q9H2Y7 1883 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 RGSL1A5PLK6 1076 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 OR52A4PA6NMU1 304 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 RECKO95980 971 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 ZNF7P17097 686 aaPredicted RBP17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 GJC1P36383 396 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 DRG2P55039 364 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 RPL26P61254 145 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 PDE1BQ01064 536 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 NIPAL4Q0D2K0 466 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 KLHL30Q0D2K2 578 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 TUBB3Q13509 450 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 GPR18Q14330 331 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 PIGHQ14442 188 aaPredicted RBP17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 IFI16Q16666 785 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 QPCTQ16769 361 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 SASS6Q6UVJ0 657 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 PRSS42Q7Z5A4 293 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 ADGRG6Q86SQ4 1221 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 LRRTM4Q86VH4 590 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 ARRDC2Q8TBH0 407 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 TEKT4Q8WW24 435 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 THAP4Q8WY91 577 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 BTBD6Q96KE9 485 aa17.72■□□□□ 0.43
CHCHD3-203ENST00000448878 LYSMD1Q96S90 227 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms