RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PSMD3O43242 534 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 MTX2O75431 263 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 CPNE6O95741 557 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 VCLP18206 1134 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 STIP1P31948 543 aaKnown RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 ADRA1AP35348 466 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 PCBP4P57723 403 aaKnown RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 OR1D5P58170 312 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 ERVPABLB-1P60509 514 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 B4GALNT1Q00973 533 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 TMEM115Q12893 351 aaPredicted RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 EIF3IQ13347 325 aaKnown RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 CHRNA6Q15825 494 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 PLA2G4EQ3MJ16 856 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 LDLRAP1Q5SW96 308 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 MEI1Q5TIA1 1274 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 C19orf48Q6RUI8 117 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 CRTC3Q6UUV7 619 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 ZNF662Q6ZS27 426 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 RAB11FIP2Q7L804 512 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 SLC9B2Q86UD5 537 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 TRAPPC5Q8IUR0 188 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 FBXO39Q8N4B4 442 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 AVL9Q8NBF6 648 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 TRIM58Q8NG06 486 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 OR4K2Q8NGD2 314 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 SLC35B2Q8TB61 432 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 DTX3LQ8TDB6 740 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 SH3KBP1Q96B97 665 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 LIN37Q96GY3 246 aaPredicted RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 AHCYL2Q96HN2 611 aaKnown RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 SLC38A3Q99624 504 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 GORASP1Q9BQQ3 440 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 FOXP3Q9BZS1 431 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 IL26Q9NPH9 171 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 KLC4Q9NSK0 619 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 KCNK4Q9NYG8 393 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 AKAP7Q9P0M2 348 aaPredicted RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 TBC1D29Q9UFV1 150 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 ZNF148Q9UQR1 794 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 R3HDM2Q9Y2K5 976 aaKnown RBP11.07□□□□□ -0.64
RFFL-204ENST00000414419 PCDHGA8Q9Y5G5 932 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 ARL5AQ9Y689 179 aa11.07□□□□□ -0.64
RFFL-204ENST00000414419 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 ZNF106Q9H2Y7 1883 aaKnown RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 KIR2DS5A0A0G2JLQ3 304 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 A0A0G2JNG1 304 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 TCRBV7S2A1N4TA0A589 114 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 GOLGA6L3A6NEY3 463 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 KIR2DS3K7RE56 304 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 CHUKO15111 745 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 PPM1DO15297 605 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 B4GAT1O43505 415 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A9O60656 530 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 DXOO77932 396 aaKnown RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 TNFSF15O95150 251 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 JMJD7P0C870 316 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 F3P13726 295 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 ZNF7P17097 686 aaPredicted RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A6P19224 532 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A1P22309 533 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A4P22310 534 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 AKT1P31749 480 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 CCKBRP32239 447 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A3P35503 534 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A5P35504 534 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 EIF2S3P41091 472 aaKnown RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 ABCG1P45844 678 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 FASLGP48023 281 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 LMAN1P49257 510 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 CLCNKAP51800 687 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 HHEXQ03014 270 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 OLIG2Q13516 323 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 SPARCL1Q14515 664 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 KIR2DS5Q14953 304 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 CLPPQ16740 277 aaPredicted RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 PHF19Q5T6S3 580 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 IYDQ6PHW0 289 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 USP53Q70EK8 1073 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 ZNF438Q7Z4V0 828 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 B3GNT8Q7Z7M8 397 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 SLC13A5Q86YT5 568 aaPredicted RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 SFRP1Q8N474 314 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 ZNF248Q8NDW4 579 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 OR10G6Q8NH81 332 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 ZNF398Q8TD17 642 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 SLC37A2Q8TED4 501 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 ATG4AQ8WYN0 398 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 TMEM159Q96B96 161 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 SLC46A1Q96NT5 459 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 CMKLR1Q99788 373 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 TIMM29Q9BSF4 260 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.06□□□□□ -0.64
RFFL-204ENST00000414419 LRRC40Q9H9A6 602 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 GRPEL1Q9HAV7 217 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A7Q9HAW7 530 aa11.06□□□□□ -0.64
RFFL-204ENST00000414419 UGT1A10Q9HAW8 530 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms