RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 RIC8BQ9NVN3 520 aa17.82■□□□□ 0.44
PHF1-201ENST00000374512 NLE1Q9NVX2 485 aaPredicted RBP17.82■□□□□ 0.44
PHF1-201ENST00000374512 IRAK4Q9NWZ3 460 aa17.82■□□□□ 0.44
PHF1-201ENST00000374512 SUN2Q9UH99 717 aa17.82■□□□□ 0.44
PHF1-201ENST00000374512 CROCCQ5TZA2 2017 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 LRRC14BA6NHZ5 514 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 TRIM64BA6NI03 449 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 TPST1O60507 370 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 NDST3O95803 873 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 PSMA3P25788 255 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 CCND3P30281 292 aaPredicted RBP17.81■□□□□ 0.44
PHF1-201ENST00000374512 GALK1P51570 392 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 DIO3P55073 304 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 ERVK-8P63133 956 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 CYBRD1Q53TN4 286 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 FAM26DQ5JW98 314 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 KLHL35Q6PF15 583 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 ZNF280BQ86YH2 543 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 ZIC5Q96T25 663 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 IL37Q9NZH6 218 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 GMIPQ9P107 970 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 BTRCQ9Y297 605 aa17.81■□□□□ 0.44
PHF1-201ENST00000374512 FAM234BA2RU67 622 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 TMEM189-UBE2V1I3L0A0 370 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 EI24O14681 340 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 B4GALT3O60512 393 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 SNX2O60749 519 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 UGT1A6P19224 532 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 GPR15P49685 360 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 POLR2JP52435 117 aaKnown RBP17.8■□□□□ 0.44
PHF1-201ENST00000374512 EMX2Q04743 252 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 AFTPHQ6ULP2 937 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 PCSK9Q8NBP7 692 aaKnown RBP17.8■□□□□ 0.44
PHF1-201ENST00000374512 OR13C4Q8NGS5 318 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 DNAJB14Q8TBM8 379 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 IGSF8Q969P0 613 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 RETREG1Q9H6L5 497 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 SEMA4BQ9NPR2 832 aaPredicted RBP17.8■□□□□ 0.44
PHF1-201ENST00000374512 EBF1Q9UH73 591 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 GIPC1O14908 333 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 ECI2O75521 394 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 CHRM3P20309 590 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 HMOX2P30519 316 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 ETFBP38117 255 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 ZFP36L2P47974 494 aaKnown RBP17.8■□□□□ 0.44
PHF1-201ENST00000374512 DSC1Q08554 894 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 EFEMP1Q12805 493 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 CCNYL2Q5T2Q4 361 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 PAQR3Q6TCH7 311 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 LYSMD3Q7Z3D4 306 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 DPP10Q8N608 796 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 OR56A4Q8NGH8 313 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 LRRC3Q9BY71 257 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 GBF1Q92538 1859 aa17.8■□□□□ 0.44
PHF1-201ENST00000374512 FAM92AA1XBS5 289 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 ASPDHA6ND91 283 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 IFRD1O00458 451 aaPredicted RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 PFDN6O15212 129 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 TULP3O75386 442 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 EOMESO95936 686 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 GRK4P32298 578 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 MAGEA11P43364 429 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 HLCSP50747 726 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 ADARB1P78563 741 aaKnown RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 GRSF1Q12849 480 aaKnown RBP eCLIP17.79■□□□□ 0.44
PHF1-201ENST00000374512 TRIM71Q2Q1W2 868 aaKnown RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 FUBP1Q96AE4 644 aaKnown RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 TRIB3Q96RU7 358 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 MUC3BQ9H195 1237 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 TRMT13Q9NUP7 481 aaKnown RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 MAGEL2Q9UJ55 1249 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 PCDHB5Q9Y5E4 795 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 PRKAR2AP13861 404 aaKnown RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 OR1E1P30953 314 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 OR1G1P47890 313 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 ZNF140P52738 457 aaPredicted RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 RING1Q06587 406 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 CRY1Q16526 586 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 SETMARQ53H47 684 aaPredicted RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 RABL3Q5HYI8 236 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 RAP1GAP2Q684P5 730 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 NANOGP8Q6NSW7 305 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 FKBP9P1Q75LS8 142 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 HID1Q8IV36 788 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 KIAA2013Q8IYS2 634 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 CHCHD4Q8N4Q1 142 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 AADATQ8N5Z0 425 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 RPRD1AQ96P16 312 aaPredicted RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 NANOGQ9H9S0 305 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 DNAAF2Q9NVR5 837 aaKnown RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 PCTPQ9UKL6 214 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 ARIH1Q9Y4X5 557 aaPredicted RBP17.79■□□□□ 0.44
PHF1-201ENST00000374512 PCDHB3Q9Y5E6 796 aa17.79■□□□□ 0.44
PHF1-201ENST00000374512 FRMPD3Q5JV73 1810 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 ZFC3H1O60293 1989 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 UBA6A0AVT1 1052 aaPredicted RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 NDUFS3O75489 264 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 BAIAP3O94812 1187 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 MTHFD1P11586 935 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms