RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TPI1P60174 286 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 FAM187BQ17R55 369 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 TWIST2Q8WVJ9 160 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 NODALQ96S42 347 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 MBOAT4Q96T53 435 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 VAT1Q99536 393 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 BTBD2Q9BX70 525 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 SP140LQ9H930 580 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 PIGVQ9NUD9 493 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 A6NL46 340 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 H3BMM5 538 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 CHEK2O96017 543 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 F2P00734 622 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 HPRP00739 348 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 NTRK1P04629 796 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 SH3BP2P78314 561 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 CD47Q08722 323 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 RPS6KA2Q15349 733 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 GRIK4Q16099 956 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 PPHLN1Q8NEY8 458 aaKnown RBP17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 OR13J1Q8NGT2 312 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 LILRB4Q8NHJ6 448 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 SPATA22Q8NHS9 363 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 PHF10Q8WUB8 498 aaKnown RBP17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 GLMNQ92990 594 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 NT5C3BQ969T7 300 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 VPS33AQ96AX1 596 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 TBL1YQ9BQ87 522 aa17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 NOL6Q9H6R4 1146 aaKnown RBP17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 PAK1IP1Q9NWT1 392 aaPredicted RBP17.56■□□□□ 0.4
CDKN1B-201ENST00000228872 A0A1W2PP18 115 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 RRN3P2A6NIE6 340 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 TBC1D4O60343 1298 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 HTR1EP28566 365 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ARPC4P59998 168 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 SLC13A2Q13183 592 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 TOP3AQ13472 1001 aaPredicted RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ZNF789Q5FWF6 425 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 PAGE3Q5JUK9 113 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 MARCH8Q5T0T0 291 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 IL31Q6EBC2 164 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 NEK10Q6ZWH5 1172 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 PROSER1Q86XN7 944 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 RAVER1Q8IY67 606 aaKnown RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 GABPB2Q8TAK5 448 aaPredicted RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 HTRA1Q92743 480 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 HSFY1Q96LI6 401 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 SPC25Q9HBM1 224 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 NECTIN3Q9NQS3 549 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ILVBLA1L0T0 632 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 TTC34A8MYJ7 566 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 PSMD3O43242 534 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 MAN1A2O60476 641 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 SOAT2O75908 522 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 KRT75O95678 551 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CHRNA1P02708 482 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ARF4P18085 180 aaPredicted RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 LBPP18428 481 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 KCNC1P48547 511 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CPT1AP50416 773 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 LSM3P62310 102 aaKnown RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 FSCN1Q16658 493 aaKnown RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CATSPEREQ5SY80 951 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 UNC93AQ86WB7 457 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 LACC1Q8IV20 430 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 KIAA2013Q8IYS2 634 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 DYNC2LI1Q8TCX1 351 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 FAR1Q8WVX9 515 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 NSMCE2Q96MF7 247 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 AMBRA1Q9C0C7 1298 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 PIF1Q9H611 641 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ALG9Q9H6U8 611 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CAPN15O75808 1086 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 HGFP14210 728 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CES1P23141 567 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ADRA1BP35368 520 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 PIGAP37287 484 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 FOXA1P55317 472 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 OR4D2P58180 307 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 ADIGQ0VDE8 80 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 SEMA3BQ13214 749 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 SYPL2Q5VXT5 272 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 TUBGCP3Q96CW5 907 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 RDH12Q96NR8 316 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CYP2S1Q96SQ9 504 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 FEM1AQ9BSK4 669 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 CCDC90BQ9GZT6 254 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 SMURF2Q9HAU4 748 aa17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDKN1B-201ENST00000228872 PTGES3LE9PB15 166 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 SLC1A7O00341 560 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 PPP6CO00743 305 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 SNPHO15079 494 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 ASNA1O43681 348 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 CDK14O94921 469 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 EIF2DP41214 584 aaKnown RBP17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 PPP5CP53041 499 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms