RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 SMPD1P17405 629 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 WARSP23381 471 aaKnown RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 ILF2Q12905 390 aaKnown RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 CCINQ13939 588 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 PCLAFQ15004 111 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 MGAT5BQ3V5L5 792 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 PGAM4Q8N0Y7 254 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 FSTL5Q8N475 847 aaPredicted RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 EFHBQ8N7U6 833 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 MINDY2Q8NBR6 621 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 ADCY4Q8NFM4 1077 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 HPS1Q92902 700 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 MYLPFQ96A32 169 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 WACQ9BTA9 647 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 KCNK13Q9HB14 408 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 MID1IP1Q9NPA3 183 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 FNIP2Q9P278 1114 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 TSR3Q9UJK0 312 aaKnown RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 GTF2A1LQ9UNN4 478 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 CRYL1Q9Y2S2 319 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 MFHAS1Q9Y4C4 1052 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 H0YJX3 145 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 RAMP2O60895 175 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 RNASEH1O60930 286 aaKnown RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 HOXB8P17481 243 aaPredicted RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 NR4A1P22736 598 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 TIGD2Q4W5G0 525 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 TMEM130Q8N3G9 435 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 SPATA22Q8NHS9 363 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 NTAN1Q96AB6 310 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 FCRL2Q96LA5 508 aaPredicted RBP10.39□□□□□ -0.75
LIG1-220ENST00000601091 ASB2Q96Q27 587 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 NPAS2Q99743 824 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 ALG9Q9H6U8 611 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 SLC39A1Q9NY26 324 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 NDUFAF1Q9Y375 327 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 TRPV2Q9Y5S1 764 aa10.39□□□□□ -0.75
LIG1-220ENST00000601091 UBXN8O00124 270 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 SMPD2O60906 423 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 FASP25445 335 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 ACADVLP49748 655 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 WNT3AP56704 352 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 SGCGQ13326 291 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 NFYCQ13952 458 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 PAFAH1B3Q15102 231 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 FSCN1Q16658 493 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 SLC9B1Q4ZJI4 515 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CLEC4FQ8N1N0 589 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CNTD1Q8N815 330 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 FBXO32Q969P5 355 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 DCUN1D1Q96GG9 259 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 SEPT5Q99719 369 aaPredicted RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 NUDT16L1Q9BRJ7 211 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 FBXO44Q9H4M3 255 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 SPAG4Q9NPE6 437 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 GDAP2Q9NXN4 497 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 PGAP2Q9UHJ9 254 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 PCOLCE2Q9UKZ9 415 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 MYBPHLA2RUH7 354 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CLOCKO15516 846 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 TREHO43280 583 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CHRNGP07510 517 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 SERPINF2P08697 491 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CTNNB1P35222 781 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 ASMTP46597 345 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 BRMS1LQ5PSV4 323 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 PRMT9Q6P2P2 845 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 FRMD7Q6ZUT3 714 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 IKBIPQ70UQ0 350 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 ARPINQ7Z6K5 226 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 BBS7Q8IWZ6 715 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 NAT14Q8WUY8 206 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 DGCR14Q96DF8 476 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 RMND5BQ96G75 393 aaPredicted RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 PCED1BQ96HM7 432 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 RADILQ96JH8 1075 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 NPY6RQ99463 290 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 TMPRSS4Q9NRS4 437 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 FAM105AQ9NUU6 356 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 OXSMQ9NWU1 459 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 MYRFQ9Y2G1 1151 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 VWA7Q9Y334 891 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 RPLP2P05387 115 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 EEF1DP29692 281 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 AQP4P55087 323 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 ZNF33BQ06732 778 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CLEC2AQ6UVW9 174 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CLEC20AQ6ZU45 233 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 HEATR4Q86WZ0 1026 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 PHTF2Q8N3S3 785 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 FBXO30Q8TB52 745 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 MOCOSQ96EN8 888 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 KANSL3Q9P2N6 904 aa10.38□□□□□ -0.75
LIG1-220ENST00000601091 TRMT6Q9UJA5 497 aaKnown RBP10.38□□□□□ -0.75
LIG1-220ENST00000601091 ST3GAL5Q9UNP4 418 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms