RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 OVGP1Q12889 678 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 CRY1Q16526 586 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 ZCCHC23Q6ZST2 131 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 PIM3Q86V86 326 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 KIRREL3Q8IZU9 778 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 NXPE1Q8N323 547 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 SMRP1Q8NCR6 262 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 GPR26Q8NDV2 337 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 C10orf82Q8WW14 230 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 FGF14Q92915 247 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 DYRK4Q9NR20 520 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 ZDHHC3Q9NYG2 299 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 KCNK4Q9NYG8 393 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 PPM1HQ9ULR3 514 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 DENND4AQ7Z401 1863 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 ANHXE9PGG2 379 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 H0Y858 1186 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 OR1I1O60431 355 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 DLX3O60479 287 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 NPHS1O60500 1241 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 SBK3P0C264 359 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 TPBGLP0DKB5 382 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 HNRNPLP14866 589 aaKnown RBP eCLIP13.67□□□□□ -0.224e-7■■□□□ 13.3
TPM1-215ENST00000558868 LTBRP36941 435 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 NSG1P42857 185 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 PGGT1BP53609 377 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 IL2P60568 153 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.22
TPM1-215ENST00000558868 HTR4Q13639 388 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 CFAP157Q5JU67 520 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 CTSL3PQ5NE16 218 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 PAQR3Q6TCH7 311 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 TMEM207Q6UWW9 146 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 MACC1Q6ZN28 852 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 PIWIL4Q7Z3Z4 852 aaKnown RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 NRSN1Q8IZ57 195 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 SPATA6LQ8N4H0 392 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 STAG3L4Q8TBR4 150 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 PIP4K2CQ8TBX8 421 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 PIWIL2Q8TC59 973 aaKnown RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 ANKRD49Q8WVL7 239 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 CCT6BQ92526 530 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 INPP5DQ92835 1189 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 COPS8Q99627 209 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 GPR21Q99679 349 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 DRC3Q9H069 523 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 WWP1Q9H0M0 922 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 FAM83DQ9H4H8 585 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 STN1Q9H668 368 aaKnown RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 SMOXQ9NWM0 555 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 KLHL42Q9P2K6 505 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 FAM50BQ9Y247 325 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
TPM1-215ENST00000558868 DHRS7Q9Y394 339 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 TRANK1O15050 2925 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 SCN8AQ9UQD0 1980 aa13.67□□□□□ -0.22
TPM1-215ENST00000558868 A0A0G2JND7 137 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 SYCE1LA8MT33 242 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 CFAP99D6REC4 459 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 ARNTLO00327 626 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 RNASEH1O60930 286 aaKnown RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 NIPSNAP2O75323 286 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 HLA-EP13747 358 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 UGT1A6P19224 532 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 UGT1A1P22309 533 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 UGT1A4P22310 534 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 IGFBP4P22692 258 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 UGT1A3P35503 534 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 UGT1A5P35504 534 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 MMP12P39900 470 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 RGS4P49798 205 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 NAA20P61599 178 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 NFKB2Q00653 900 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 MESP2Q0VG99 397 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 RCN2Q14257 317 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 GRIN2CQ14957 1233 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 ZNF284Q2VY69 593 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 TTLL9Q3SXZ7 439 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 LACTB2Q53H82 288 aaPredicted RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 ISCA2Q86U28 154 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 RFWD2Q8NHY2 731 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 KIAA1191Q96A73 305 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 PDLIM5Q96HC4 596 aaKnown RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 LRRC37BQ96QE4 947 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms