RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 DEF6Q9H4E7 631 aa11.36□□□□□ -0.59
RAB5C-203ENST00000546881 FAM83DQ9H4H8 585 aa11.36□□□□□ -0.59
RAB5C-203ENST00000546881 PCDH9Q9HC56 1237 aa11.36□□□□□ -0.59
RAB5C-203ENST00000546881 ARFGAP3Q9NP61 516 aa11.36□□□□□ -0.59
RAB5C-203ENST00000546881 SARS2Q9NP81 518 aaKnown RBP11.36□□□□□ -0.59
RAB5C-203ENST00000546881 PKD2L2Q9NZM6 624 aa11.36□□□□□ -0.59
RAB5C-203ENST00000546881 VPS18Q9P253 973 aa11.36□□□□□ -0.59
RAB5C-203ENST00000546881 RCOR3Q9P2K3 495 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-203ENST00000546881 BZW2Q9Y6E2 419 aaKnown RBP11.36□□□□□ -0.59
RAB5C-203ENST00000546881 FADS2P1A8MWK0 482 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 MYO1FO00160 1098 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 POLR1CO15160 346 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-203ENST00000546881 GRID2O43424 1007 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 STK17BO94768 372 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 PRLP01236 227 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 HLA-DQB2P05538 268 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 CES1P23141 567 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 SPINT3P49223 89 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 FOXM1Q08050 763 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 CDC20Q12834 499 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 DPYSL3Q14195 570 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 PLA2G4EQ3MJ16 856 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ATP13A4Q4VNC1 1196 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ANKRD20A8PQ5CZ79 823 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ZNF648Q5T619 568 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 TIPARPQ7Z3E1 657 aaKnown RBP11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ARHGAP22Q7Z5H3 698 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 PHYKPLQ8IUZ5 450 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ARRDC2Q8TBH0 407 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 MAML1Q92585 1016 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-203ENST00000546881 ZPBPQ9BS86 351 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 HERPUD2Q9BSE4 406 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 EFHD1Q9BUP0 239 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-203ENST00000546881 PRDM8Q9NQV8 689 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 PDP2Q9P2J9 529 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 CNOT6Q9ULM6 557 aaKnown RBP11.35□□□□□ -0.59
RAB5C-203ENST00000546881 BOD1L1Q8NFC6 3051 aa11.35□□□□□ -0.59
RAB5C-203ENST00000546881 SPTA1P02549 2419 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 KIR2DS5A0A0G2JLQ3 304 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 A0A0G2JNG1 304 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 AKR1B15C9JRZ8 316 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 KIR2DS3K7RE56 304 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CYP1A2P05177 515 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 F3P13726 295 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 TYRP1P17643 537 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 TCN2P20062 427 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CCNCP24863 283 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 OAS2P29728 719 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CD86P42081 329 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 ZNF75DP51815 510 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 EPHA4P54764 986 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 GALNT3Q14435 633 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 KIR2DS5Q14953 304 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 PAFAH1B3Q15102 231 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 SEPT7Q16181 437 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 IGFBP7Q16270 282 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 QPCTQ16769 361 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 HENMT1Q5T8I9 393 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 ATP1A1-AS1Q5TC04 95 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 ALG1LQ6GMV1 187 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CRTC3Q6UUV7 619 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CPNE8Q86YQ8 564 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CNGA4Q8IV77 575 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 TRIM48Q8IWZ4 208 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 OR8K1Q8NGG5 319 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 STARD8Q92502 1023 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 WDR24Q96S15 920 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 MLPHQ9BV36 600 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 SPATA16Q9BXB7 569 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 OR2AG1Q9H205 316 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 RMI1Q9H9A7 625 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 FBXO8Q9NRD0 319 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 KLC4Q9NSK0 619 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 CPNE7Q9UBL6 633 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 TUBD1Q9UJT1 453 aa11.34□□□□□ -0.59
RAB5C-203ENST00000546881 RPL26L1Q9UNX3 145 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 TLN1Q9Y490 2541 aaKnown RBP11.34□□□□□ -0.59
RAB5C-203ENST00000546881 MAST4O15021 2626 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 A0A087X0T9 212 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 OR5K4A6NMS3 321 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 PDZK1P1A8MUH7 402 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 GOLGA6L6A8MZA4 724 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 KCNK1O00180 336 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 NUAK1O60285 661 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MFAP3LO75121 409 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MTA2O94776 668 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 JCHAINP01591 159 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 PIRTP0C851 137 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 FAM228BP0C875 321 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-203ENST00000546881 AMD1P17707 334 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MX2P20592 715 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 SEPHS1P49903 392 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms