RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 VSTM4Q8IW00 320 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 NRSN1Q8IZ57 195 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 AGBL5Q8NDL9 886 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 EID2BQ96D98 161 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 SLC45A3Q96JT2 553 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 OR2M4Q96R27 311 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 LYSMD1Q96S90 227 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 DDA1Q9BW61 102 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 CEP41Q9BYV8 373 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 DEF6Q9H4E7 631 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ABHD10Q9NUJ1 306 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 SLC39A1Q9NY26 324 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 HEY1Q9Y5J3 304 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 OAS3Q9Y6K5 1087 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 NBPF19A0A087WUL8 3843 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 LRRD1A4D1F6 860 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 FADS2P1A8MWK0 482 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 MFAP3LO75121 409 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 UTP20O75691 2785 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 MTA2O94776 668 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 EML2O95834 649 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ATP1A1P05023 1023 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 TPM3P06753 285 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 PRKAR1AP10644 381 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 CSTF2P33240 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 SPINT3P49223 89 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 RPL26P61254 145 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 IFI35P80217 286 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 TRIM14Q14142 442 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ZFYVE27Q5T4F4 411 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 SLC9A4Q6AI14 798 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 B4GALNT4Q76KP1 1039 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 OR4D9Q8NGE8 314 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 EXD1Q8NHP7 514 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 APOBEC4Q8WW27 367 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 MIB2Q96AX9 1013 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ASPSCR1Q9BZE9 553 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 BRD8Q9H0E9 1235 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 GPN2Q9H9Y4 310 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 LCMT1Q9UIC8 334 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 RPL26L1Q9UNX3 145 aaKnown RBP11.76□□□□□ -0.53
GABPB1-206ENST00000543881 PRKAB1Q9Y478 270 aa11.76□□□□□ -0.53
GABPB1-206ENST00000543881 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 TRBV23OR9-2A0A075B6M9 112 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 C1orf232A0A0U1RR37 186 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 ZNF487B1APH4 448 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 ANKRD66B4E2M5 251 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 CBFA2T2O43439 604 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 DUX1O43812 170 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 DNAJC6O75061 913 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 MPSTP25325 297 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 CSF2RBP32927 897 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 GPR3P46089 330 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 CDC20Q12834 499 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 BIRC2Q13490 618 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 LACTB2Q53H82 288 aaPredicted RBP11.75□□□□□ -0.53
GABPB1-206ENST00000543881 DCAF12Q5T6F0 453 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 HENMT1Q5T8I9 393 aaKnown RBP11.75□□□□□ -0.53
GABPB1-206ENST00000543881 NKAIN2Q5VXU1 208 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 ATCAYQ86WG3 371 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 FAM129CQ86XR2 697 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 OLFM3Q96PB7 478 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 TRIB3Q96RU7 358 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 MLPHQ9BV36 600 aaPredicted RBP11.75□□□□□ -0.53
GABPB1-206ENST00000543881 ZNHIT6Q9NWK9 470 aaKnown RBP11.75□□□□□ -0.53
GABPB1-206ENST00000543881 OCIAD1Q9NX40 245 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 PILRAQ9UKJ1 303 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 DNPEPQ9ULA0 475 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 HYOU1Q9Y4L1 999 aa11.75□□□□□ -0.53
GABPB1-206ENST00000543881 NOTCH2Q04721 2471 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
GABPB1-206ENST00000543881 IGHV1OR21-1A0A087WYE8 117 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 PRR19A6NJB7 356 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 EFCAB7A8K855 629 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 B4E171 279 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 APOL1O14791 398 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 MTSS1O43312 755 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 ASMTLO95671 621 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 PYGLP06737 847 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 THRAP10827 490 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 PTMSP20962 102 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 CA4P22748 312 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 TSPAN7P41732 249 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 CD97P48960 835 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 AP1B1Q10567 949 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 GALNT3Q14435 633 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 ANKS6Q68DC2 871 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 LYSMD3Q7Z3D4 306 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 KDELC2Q7Z4H8 507 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 VSIG1Q86XK7 387 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 RAVER1Q8IY67 606 aaKnown RBP11.74□□□□□ -0.53
GABPB1-206ENST00000543881 NLGN4XQ8N0W4 816 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 RNF214Q8ND24 703 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 NLGN4YQ8NFZ3 816 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms