RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 H3BNC9 293 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 CD3EAPO15446 510 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 OXSR1O95747 527 aaPredicted RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 CCL5P13501 91 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 HLA-DPA1P20036 260 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 ATP5F1P24539 256 aaPredicted RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 ZBED5Q49AG3 693 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 FSCBQ5H9T9 825 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 TECRLQ5HYJ1 363 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 FRMD7Q6ZUT3 714 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 EFHBQ8N7U6 833 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 PDZD8Q8NEN9 1154 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 ZNF461Q8TAF7 563 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 TMEM169Q96HH4 297 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 CDK5RAP1Q96SZ6 601 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 TRNAU1APQ9NX07 287 aaKnown RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.51□□□□□ -0.57
USP35-207ENST00000530546 VPS28Q9UK41 221 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
USP35-207ENST00000530546 SNAP91O60641 907 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 CXCL10P02778 98 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 MBL2P11226 248 aaPredicted RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 ARSAP15289 507 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 KPNA2P52292 529 aaKnown RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 TWF1Q12792 350 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 PPM1LQ5SGD2 360 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 SLC39A5Q6ZMH5 540 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 CARNMT1Q8N4J0 409 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 LPCAT1Q8NF37 534 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 ZNF420Q8TAQ5 688 aaPredicted RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 TSPAN17Q96FV3 270 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 LENG8Q96PV6 779 aaPredicted RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 EPS15L1Q9UBC2 864 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 B3GNT3Q9Y2A9 372 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 BACE2Q9Y5Z0 518 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 PRSS51A0A1B0GVH4 220 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 A8MT66 165 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 CLDN11O75508 207 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 SULT1C4O75897 302 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 NDST3O95803 873 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 INHBBP09529 407 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 COX4I1P13073 169 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 NAT1P18440 290 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 NFKBIAP25963 317 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 FLOT2Q14254 428 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 C16orf87Q6PH81 154 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 CARM1Q86X55 608 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 BRSK1Q8TDC3 778 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 C12orf43Q96C57 262 aaKnown RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 SLC22A12Q96S37 553 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 HGH1Q9BTY7 390 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 COPS7BQ9H9Q2 264 aaPredicted RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 GID8Q9NWU2 228 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 NCKIPSDQ9NZQ3 722 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 CDYLQ9Y232 598 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 RNF11Q9Y3C5 154 aa11.5□□□□□ -0.57
USP35-207ENST00000530546 LAMA2P24043 3122 aaKnown RBP11.5□□□□□ -0.57
USP35-207ENST00000530546 AIM2O14862 343 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 KDELR3O43731 214 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 RPP40O75818 363 aaKnown RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 KCNC1P48547 511 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PRKAA2P54646 552 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PRMT2P55345 433 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 VEPH1Q14D04 833 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ZNF549Q6P9A3 640 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 OR4K2Q8NGD2 314 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ZNF597Q96LX8 424 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 MGME1Q9BQP7 344 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 CLK4Q9HAZ1 481 aaKnown RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 PAK6Q9NQU5 681 aaPredicted RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 CATSPERZQ9NTU4 200 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TRIM64CA6NLI5 447 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 H0Y626 953 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PSMD12O00232 456 aaPredicted RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 INSIG1O15503 277 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 MT-CO1P00395 513 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 SOD2P04179 222 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TTKP33981 857 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 DEFB103AP81534 67 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 MRPS22P82650 360 aaKnown RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 SMAD3P84022 425 aaKnown RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 MOGQ16653 247 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 NDUFA5Q16718 116 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 RGS21Q2M5E4 152 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ADGRF1Q5T601 910 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 MRNIPQ6NTE8 343 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 GLT6D1Q7Z4J2 308 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 DNAJB7Q7Z6W7 309 aaPredicted RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 SNX32Q86XE0 403 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 CLVS1Q8IUQ0 354 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms